Gene Sros_4553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4553 
Symbol 
ID8667847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5071262 
End bp5072059 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content69% 
IMG OID 
ProductAraC family transcriptional regulator 
Protein accessionYP_003340160 
Protein GI271965964 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.340606 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.506644 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAG CCGTCGAATC CATGATCGAG GCCGTCGAAT CCGCCGTCCC GACCGCGGTA 
GGCGTGATCG TTGTCGGGCA CTTCCCGCTG TCATCGGGAC AGTGGATCTC CCCGCACAGC
CACACGCACC ACCAGCTGGC CTGGACGCGG AGCGGCGTCC TCAGTGTCGC CGTGGACGAC
GCGTACTGGG TCCTGCCGCC CACCCGGGCC CTGTGGTTGC CGGCGGGAGT CGTCCACCGG
ACCGGCGCGA CCCGCGACGC GCTGCTGTGC AGCCTCTACC TCAATCCAGT GCGGTGCACT
CTGAATTGGA CGGAGCCCAC TGCGGTCGGC GTCAACGGAC TGCTGGCCCA TCTGATCGCC
TATCTCGCCC GTGAAGACCT CGCCGATGAC GCGCGATTGC GGGCCGAGGC GGTAGTGCTG
GACCTGTTGC ACCCTTTGCC GGCCCTGCCC ATCGATGTTC CGCGTCCCGT GGACGAACGC
GTACGCGCCG TGGCCGACAC CCTGCTCGCC GACCCCTCCG ACTCCCGGAG CCTTGAAGCC
CATGCACGCT CCATCGGAGT GAGCCGACGC ACCCTGACGC GGCTGTTCGT CCGTGACACG
GGGTTGAGCT TCGACCGCTG GCGCACTCAC ATGCGACTGC GGGCCGCCTT GCCTCTCCTC
GCCGAAGGCC GGCCGGTGTC GCAGGTATCG CACACGGTGG GGTACGCGAC CCCGAGCGCT
TTCCTCGCGG CGTTCCGCCG GACCGTCGGC ACCTCACCCG GGCGCTACCT CAACGGAGAG
GCCGTTCTCG ACGTTTGA
 
Protein sequence
MIEAVESMIE AVESAVPTAV GVIVVGHFPL SSGQWISPHS HTHHQLAWTR SGVLSVAVDD 
AYWVLPPTRA LWLPAGVVHR TGATRDALLC SLYLNPVRCT LNWTEPTAVG VNGLLAHLIA
YLAREDLADD ARLRAEAVVL DLLHPLPALP IDVPRPVDER VRAVADTLLA DPSDSRSLEA
HARSIGVSRR TLTRLFVRDT GLSFDRWRTH MRLRAALPLL AEGRPVSQVS HTVGYATPSA
FLAAFRRTVG TSPGRYLNGE AVLDV