| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_4511 |
|---|
| Symbol | |
|---|
| ID | 8667805 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 5029109 |
|---|
| End bp | 5030947 |
|---|
| Gene Length | 1839 bp |
|---|
| Protein Length | 612 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter, ATP-binding/permease protein |
|---|
| Protein accession | YP_003340119 |
|---|
| Protein GI | 271965923 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.204687 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.463394 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCA CCGACCTTGC CCAGGCGAGG GAGCGGTCCG CACCACCACC GGAGGCCGAC
TCCGGGGCGG GACAGAGCCT GGCGGGGCTG CTGCGCCCTT ATCTCCGGAG TTTCGCCGCC
GTTGTGATCC TGCAGGTCGT CGGCGCCGTC GCGGGTCTGG CGCCGCTGCT GGCGGTCGTC
GAGCTGGGGC GCACTCTGTT GTCGCCCGGC CCGATCGATC ACGGTCATGT CTGGACCGTC
GTCATCGCGG GTGCGGCCGG CCTGTTCGTC CGGCTGCTGT TCACGGCCGC CTCGTCCGGA
CTCGGGCACA TTCTCGACGG CCGGGTGCAA CTGTCGTTCC GCCGGCAACT GGCCGCGCGG
CTGGGAAGCG TACCGATCGG CTGGTTCTCC CGGCGCCGCA CCGGCGAGCT GGCGAAGGTG
GTGGGCGAGG ACGTGGGTGC CGTGCACCCG TTCATCGCCC ACGCCCCCGG CGAGCTCATC
TCCGCGTTCG TGGTGCCGCT GGTGTCGCTG ATCTACCTGT TCACCATCGA CTGGCGGCTC
ACGCTGATCA CGCTGATCCC GGTGGTGCTG GCAGTGGCGC TGGTCCCGCT GCTGATGACC
CCGACCCGGC TGCGCGAGCA GGAGGAGTTC GATGCGGCGA TGGGACGGAT CGCCAGTTCC
GTCGTCGAGT TCGTCCAGGG CATCTCGGTG GTCAAGGCGT TCGGCGGCGG CGAGCGCGCC
CACCATAAGT TCCGCACGGC CGCAGACGAT TTCGCCCGCA TCTTCTACCG GATGGTGCGC
GGCCTGTCCG TGGTCGGTGC CGGCATGCAG GTGGCGCTGT CGCCGCCGTT CGTGCTGCTG
GCCGTGCTGA TCGGCGGTGC GGCTCTGATC ACGGCCGGAT CCATGGCCGT GGCCGACCTG
CTGCCCTTCC TGCTGCTCGG ACTGGGCCTG ACCGCTCCGG TCGCGGCCCT CAGCCACGGC
TTCGACGACC TGCAGGCCGC CCGGCGCGCG GTCGGCCGGA TCAAGGACGT GCTCGAGGTG
CAGGCGCTGC CGGAGCCTGC ACACCCGCTC GCCCCCCAGG GACACCGGGT GGAACTGCGT
GAGGTTCGAT TCGGCTACGA AGCCGAACAC GAGGTGCTGC GCGGGATCGA CCTGGTGCTC
GAACCCGGGA CCGTCACCGC GATCGTCGGG CCGTCGGGAA GCGGGAAGTC CACGCTGGTC
CAGCTGCTGC CGCGCTTTTT CGACCCGACC CACGGTTCGG TCGCCATCGG CGGTGTCGAT
CTGCGCGAGC TCGGCAGCCG GGAGCTCTAC CGGACGGTGT CCTTCGTCTT CCAGGACGTC
CGCCTGCTGC GCGCGTCGGT CGCCGACAAT ATCGCGCTGG CGGTACCGCA CGCCGACCGC
GACGACGTGA TCCGCGCCGC CCGGCTGGCG AATATTCACG ATCGGATTCT CCAGCTGCCG
CGTGGATACG AGTCGGTGAT CGGTGAAGAC GCCGGGCTGT CGGGCGGCGA GGCACAGCGG
ATCTCGCTCG CCCGCGCCCT GCTGGCCGCC ACGCCCGTCC TGGTGCTGGA CGAGGCGACC
TCCTTCGCCG ACCCGCAGAC CGAGCAGGCG GTGCGCCGGG CCCTGGCCAC GCTGGGGGGC
GATCGGACCA TCGTGGTCAT CGCCCATCGC CTGGAGACGG TCGCCGACGC CGACACCGTC
GTGATGCTGG AGAACGGGTC GATCGTCGAG CGCGGCAGGC CCGCCGAGCT GCTGGCACAG
AACGGAAAGT TCGCCGCGTT CTGGCAATCC CACCGATCGG CGATCGCCGA CGAGATCGAC
ACCCACCGTG GCGTACCGCA AGGAGACGAG CCCCGATGA
|
|---|
| Protein sequence | MTTTDLAQAR ERSAPPPEAD SGAGQSLAGL LRPYLRSFAA VVILQVVGAV AGLAPLLAVV
ELGRTLLSPG PIDHGHVWTV VIAGAAGLFV RLLFTAASSG LGHILDGRVQ LSFRRQLAAR
LGSVPIGWFS RRRTGELAKV VGEDVGAVHP FIAHAPGELI SAFVVPLVSL IYLFTIDWRL
TLITLIPVVL AVALVPLLMT PTRLREQEEF DAAMGRIASS VVEFVQGISV VKAFGGGERA
HHKFRTAADD FARIFYRMVR GLSVVGAGMQ VALSPPFVLL AVLIGGAALI TAGSMAVADL
LPFLLLGLGL TAPVAALSHG FDDLQAARRA VGRIKDVLEV QALPEPAHPL APQGHRVELR
EVRFGYEAEH EVLRGIDLVL EPGTVTAIVG PSGSGKSTLV QLLPRFFDPT HGSVAIGGVD
LRELGSRELY RTVSFVFQDV RLLRASVADN IALAVPHADR DDVIRAARLA NIHDRILQLP
RGYESVIGED AGLSGGEAQR ISLARALLAA TPVLVLDEAT SFADPQTEQA VRRALATLGG
DRTIVVIAHR LETVADADTV VMLENGSIVE RGRPAELLAQ NGKFAAFWQS HRSAIADEID
THRGVPQGDE PR
|
|---|
| |