Gene Sros_4505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4505 
Symbol 
ID8667799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5021820 
End bp5022428 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content73% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003340113 
Protein GI271965917 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.319645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACG ACGCGCCGGA CCTCCGGACG CGCAACAAGC AGGCCACCCG CATGGCGATC 
GGCGACGCCG CGCTACGGCT GGCCATCGAG CTGGGGCCCA ACGGGCTGGC CCTCGTGCGC
GTCCACGACA TCGCCACGAC CGCGGGCGTC TCGCCCCGCA CCTACAACAA CTACTTCTCC
AGCAGGGAGG AGGCGATCTG CTCCTTTCAG GCCGACCGGT CCAGGAAGGT GGGACAGGCG
CTGCGCTCCC GGCCCGACGA CGAGCCGCTC GACCAGGCCG TCATCGCCGC CGTAATCGAG
CTCTACACCA GCCCCGAGCC CGACAAGGCC GGCCTACGCA TGATCATGTC GACACCCGAG
CTGGAGGGCG AGGCGCTGAA GGCGTTCACC ATGGCGGAGG GCCCGCTCGC CGAGGCGATC
GCGGCGCGCA CCGGCACCGA CCTCGGACGC GACCTGTTCC CCGCCGTCAT GGCGGCCGCC
GTCGCCGGCG CCATCCGCGT GGCGGGACGG CGCTGGCTGG AGCCCGGCAA CACCGCCTCC
TTCGCCACCA CCCTGCGCCA CGCCCTGTGC TGCGTCCTTC CCGCCGCGCC GCCGAGCCCC
GTCACCTGA
 
Protein sequence
MNDDAPDLRT RNKQATRMAI GDAALRLAIE LGPNGLALVR VHDIATTAGV SPRTYNNYFS 
SREEAICSFQ ADRSRKVGQA LRSRPDDEPL DQAVIAAVIE LYTSPEPDKA GLRMIMSTPE
LEGEALKAFT MAEGPLAEAI AARTGTDLGR DLFPAVMAAA VAGAIRVAGR RWLEPGNTAS
FATTLRHALC CVLPAAPPSP VT