Gene Sros_4502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4502 
Symbol 
ID8667796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5019527 
End bp5020276 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content75% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003340111 
Protein GI271965915 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.789852 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCCCA CGGTTCCACC GCCAGAGGGC AGCCCGTCGG CGCCGCCGCC CCGGCGCCGA 
CCCGGTGGCC GTACCGGCCG CATCCGTACG CAGGTTCTCG ACGCGGTCCG CGCCGAGCTC
GGAGAGCGCG GCTACGACGA GCTCACCCTG GACGCCGTCG CGGCCCGCGC GGGCGTGCAT
CGCGCAACGG TGTACCGGCG CTGGCGGGAT GTCGGCGGCC TGCTCGCCGA TGTCTTCGAA
GCGGCGAGTG ACGATGACTG GCAGCCTCAG GACACCGGCT CCCTGCAGGG CGACCTGGCG
GCACTGAACC ACGAGAATCA GGCGGCCCTG ACCGCGCGGC CGCCGATCGC CGCAGCCCTG
ATCGCCGCCT CGTTCCGCTC CGAAGAAGCC GCCCGCGGCG TGCGGCGGCT CTGGGAGGAC
CGGTACGCCC GCTGTGAGGT CATCGTCAGC CGAGCCGTCC GGCGCGGAGA GCTGCCGCCG
CACACCGACG CGCGGCGACT GCTCATCGCC GCCACCGCGC CGCTCTACCA CCAGCTGGTG
CTTCTCCGTA CGCCACCCGA CCCGCACCTT CCCGACCACG CGGCCAGGAC CGCCGCCCTC
GCCGCATCCG CCGGCGCCTT CGCCACGCCG GATCCGGAGA AGCTCCTCCT CCCCGACGCC
TCCGGCCGAG ACGTGTCGGT CGGTGGCGTG GCCGCGCCGG CATCGGGTGC CGCCACCGAT
GACCACCCCT CCGATCAGCC CGGCCGGTGA
 
Protein sequence
MTPTVPPPEG SPSAPPPRRR PGGRTGRIRT QVLDAVRAEL GERGYDELTL DAVAARAGVH 
RATVYRRWRD VGGLLADVFE AASDDDWQPQ DTGSLQGDLA ALNHENQAAL TARPPIAAAL
IAASFRSEEA ARGVRRLWED RYARCEVIVS RAVRRGELPP HTDARRLLIA ATAPLYHQLV
LLRTPPDPHL PDHAARTAAL AASAGAFATP DPEKLLLPDA SGRDVSVGGV AAPASGAATD
DHPSDQPGR