Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4433 |
Symbol | |
ID | 8667727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 4947660 |
End bp | 4948259 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | putative transcriptional regulator, TetR family |
Protein accession | YP_003340046 |
Protein GI | 271965850 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.304497 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00999637 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCCCGACG CCAAAAAACC CAATCCCGCC CGCCGCAACG AGCGATCACG ACACGCGATC CTCGACGCCG CCCGCGAACT GATCCGCGAA GTGGGATACG CCAAGGTCTC GATCGAAGCG ATCGCCGCCC GCGCGGGCGT GGGCAAACAG ACCATCTACC GATGGTGGCC CTCCAAAGGA GCCGTGATCT TCGACTCCTT CCTCGCCCTC AGCGACAACC CCGAGCAAGA GGGAATGGCA CTGCCCGACA CAGGCGACAT CGAAGCCGAC CTCAAACTCG TCATGCGCGC GACAGCGGCC GAGTTCGCCG ACCCGGACTT CGAAGCCCCG ATCCGGGCAC TCAACTCAGA GATCATCAGC AATCCCGACC TCGCCGCCCA ATACCGGGAC AGACTCGCCC GCCCCGTACA GGACGCCAAG AAAGCCCGGC TACGCAGCGC ACAACAGGCA GGCCAACTCG CCCCGGACGC CGACCTCGAC CTGCTCCTCG ACGTCCTCTA CGCCCCCCTC CACCAGCGCT GGCTGCACCG CTCGGGCCCA CTCACCGCCG AATACGCCGA CGCTCTCGTC GACATCACAC TCAAAGCCTT CCGCCCCTGA
|
Protein sequence | MPDAKKPNPA RRNERSRHAI LDAARELIRE VGYAKVSIEA IAARAGVGKQ TIYRWWPSKG AVIFDSFLAL SDNPEQEGMA LPDTGDIEAD LKLVMRATAA EFADPDFEAP IRALNSEIIS NPDLAAQYRD RLARPVQDAK KARLRSAQQA GQLAPDADLD LLLDVLYAPL HQRWLHRSGP LTAEYADALV DITLKAFRP
|
| |