Gene Sros_4317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4317 
Symbol 
ID8667611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4825437 
End bp4826318 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content73% 
IMG OID 
Producttranscriptional regulator, LysR family 
Protein accessionYP_003339947 
Protein GI271965751 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.257312 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGCTAC GCCAGCTCAG GACTTTCGAG GCCGTCGTCC GGTACCGGAC CGTGACCGAC 
GCCGCCGTCG CGCTCGACCT CGCCCCCTCG TCCGTCTCCC AGCAGATCCG GACGCTCGAA
GGAGCGCTCG GCGTGGTCCT GTTCGTGCGC GGCCCCAAGG GAATGGAGCC CACCCCCGCC
GGGCAGCGGC TGCGGGGATG GGCGCGGTCG CTGCTCGACC AGGCCGAGCA GGCCACCCGC
GACGTCAGAG GCGAACGGCA GCTGCTGCGG CTCGGCGCGC TGGAGACCCT CGCCGGCTCG
CACGTGCCCC GTGTCCTCGC CCGATTCGCC GAACGCCGGC CCGACATCGA GGTCGAGATT
CACTCCGAAC GCGCCCGTGA CGGACTCCTC GCCGACGTGA TCGAGGGACG GCTCGAAGCC
GCCCTGCTGC TGGACTCCGG CGACGACGTC GGCGGACTCG GCTTTCCCGC CCCCGCCGAA
CCGCTCGCCT TCGTCGACCT CGACCCGGTC CCCCTCGCGC TGGTGGCCGC GCCGACCCAC
CCTCTCGCCG CCCGAGCCGC CCTGACCCCC GGTGACCTCA GGCACGAGCG GCTCCTGGTC
AACGTCCCTG AATGCTCGTT CTGGATGGCG GGGAACAAGA TCCTCGGCTC CGGTCCCAAA
CGGATCAGAG CCGGAGGCGT CCCGGTGATG CGCTCGTGGG CCGAGCACGG GCTCGGAGTC
TCGCTTCTCC CCCGGTTCGC GGTCGCCGAC AGCCTCCGCG CCGGCACCCT GGTCCGGCTC
GACCTCCCGC TCCCGGATCT CAGCCTGCGG CTCGTCTGGC GAGAAGACCG GGAGTCGCTG
CCCGGCATGC GTGACGTCCT GTACGCCGCG GCCCGCCCCT GA
 
Protein sequence
MELRQLRTFE AVVRYRTVTD AAVALDLAPS SVSQQIRTLE GALGVVLFVR GPKGMEPTPA 
GQRLRGWARS LLDQAEQATR DVRGERQLLR LGALETLAGS HVPRVLARFA ERRPDIEVEI
HSERARDGLL ADVIEGRLEA ALLLDSGDDV GGLGFPAPAE PLAFVDLDPV PLALVAAPTH
PLAARAALTP GDLRHERLLV NVPECSFWMA GNKILGSGPK RIRAGGVPVM RSWAEHGLGV
SLLPRFAVAD SLRAGTLVRL DLPLPDLSLR LVWREDRESL PGMRDVLYAA ARP