Gene Sros_4288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4288 
Symbol 
ID8667582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4788094 
End bp4789257 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content73% 
IMG OID 
Producttranscriptional regulator, CdaR 
Protein accessionYP_003339921 
Protein GI271965725 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.743775 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACGAGC TGCTGGAGCG CCAGGCGACC AGCCTGGCCA GGCAGCTCGT GCACGTCTTC 
GTCGAGGAGA TCCCCATCTA CCGGCGACTG CCCAGGGAGG AGCTCGACGG CGACATCACC
AGGATCACCG AGCACAACCT GCGGATGATC TGCGAGATGT TCCGCCACGG GCGCCCGCCC
TCCTCCGCCG AGCTGGCCCC GCTACGCGAC TCGGCCGCGC GCCGCGCCCA GGAACGGGTA
CCGCTCGAAG CCCTGCTGGC GGCCTACCAC CTGGGCACCC GCTGGGTCTG GGACCGCCTG
ATCACCACCG CCACGCCGGC CGACTTCGCG GCGGTGGTCG ACATGAACCG CCTCGTCCTG
CTCTACAGCG AGGTGGTGAC CTCCGCTGTA TGCACCGCCT ACCTGAGCGA GCGCGAGGGC
ATGCTCAGCC AGGAGCAGCA CGCCATGCAC GCCGCCGTAT CCGCGCTGCT CGGCGGCGAT
CACACGGCCC TGGCGGCGGT ACGGCTGGCG CCCGGCTACC TGGTCATGGC GATCGCGGTG
GGTGCGCACC CCGACGAGAA GCAGGACGAG CCCGGCGGAT CGATCGCCGC CCGGCGCAAG
CTGGCCAGGA TCAGGGCCGC CGTGCAGCGT TACGCCTCCG AGCAGGTCCT GTTCGTGCTC
GACGCGACGG GCGGCCTCGT GCTGCTGCCC TGCAGCGGCG AGGTGCCGAT CGTGACCGAG
GTCGTCGAGG CGATGTCCGG GGCGGCGGGG GTGCCGATCT GGGCGGCGAC CGAGCAGGCG
ACGCCCGCCG AGGTCTCGGC CGCCGCAGGA GTGGCCGAGG AGGTCCTGGA GGTGGCGCGG
ATCTTCGGGC GCCCGCCGGG CGCCTACCTG CTGGCCGACG TGCTGCTGGA GTACCAGCTC
ACCCGGCCGA GCAGGGCCAC CGCCAGGCTC GCGGGTCTGC TCGACCCCCT GCTGGACAAC
CCCGACCTGC TCAGGACGCT CAAGGCCTAC CTGGAGACCG GGCTCGACCG CCGCCGCACG
GCCGAGCTGT TGCACGTGCA CCCGAACACC GTCGACTACC GGTTGCGGCG GGCGGTGAGC
TTGACCGGCC TCGACCCGGC CGACCCGGCG CAGCTCCAGC AGATCGGAGC CGCGCTGGCG
GCCAGGAGGC TCACGCCCCG CTGA
 
Protein sequence
MHELLERQAT SLARQLVHVF VEEIPIYRRL PREELDGDIT RITEHNLRMI CEMFRHGRPP 
SSAELAPLRD SAARRAQERV PLEALLAAYH LGTRWVWDRL ITTATPADFA AVVDMNRLVL
LYSEVVTSAV CTAYLSEREG MLSQEQHAMH AAVSALLGGD HTALAAVRLA PGYLVMAIAV
GAHPDEKQDE PGGSIAARRK LARIRAAVQR YASEQVLFVL DATGGLVLLP CSGEVPIVTE
VVEAMSGAAG VPIWAATEQA TPAEVSAAAG VAEEVLEVAR IFGRPPGAYL LADVLLEYQL
TRPSRATARL AGLLDPLLDN PDLLRTLKAY LETGLDRRRT AELLHVHPNT VDYRLRRAVS
LTGLDPADPA QLQQIGAALA ARRLTPR