Gene Sros_4260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4260 
Symbol 
ID8667554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4744479 
End bp4745057 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content67% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003339902 
Protein GI271965706 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.370014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.537998 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGGA CCAAGGAGTT CGATCCTGAC GCGGTGCTGC AGGCGGCCCT GGAACTGTTC 
TGGCAGCGGG GGTACGAGGC GACGTCGATG GCCGACCTCG TCGAGCACCT GGGAATCGGC
AGAGCCAGCA TCTACGCCAC TTTCGGCAAC AAGCGCGACT TCTACCTGAA GGCCTACGAG
CGCTACCTGC AAAACGGGAT CGACTTCGTC GGCCTGCTGT CACAACCGGG GCCAGTGCTG
CCCGCCGTAC GCGCGCTGAT CGAGCGTTTC GCCGAGGAGT CCGCGCACGA CGAGAAGCGC
CGCGGCTGCC TGGTGGTCAA CACTGCCGTG GAGGTGGCAC CGCACGACCC CGCGCTAGCC
CGGCGGGTGG AGTCCAACTG GGATTTCATC GAGACCACGC TGACCTCAGC GCTGACCAGG
GCCCGCGCCC AGGGCGAGCT CACCGAGGAG AAGGATCCTC GGGCGCTCGC CCGGTTCCTG
CTGACCGTGA TGCAGGGCAT GCGGGTCATC GGCAAGGGTT CCAGCGACCC CGAGCGCCTC
TACGACACCG CCGCACAGGC GCTGCGCGCT CTCGAATAG
 
Protein sequence
MARTKEFDPD AVLQAALELF WQRGYEATSM ADLVEHLGIG RASIYATFGN KRDFYLKAYE 
RYLQNGIDFV GLLSQPGPVL PAVRALIERF AEESAHDEKR RGCLVVNTAV EVAPHDPALA
RRVESNWDFI ETTLTSALTR ARAQGELTEE KDPRALARFL LTVMQGMRVI GKGSSDPERL
YDTAAQALRA LE