| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_4233 |
|---|
| Symbol | |
|---|
| ID | 8667527 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 4717489 |
|---|
| End bp | 4718781 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003339878 |
|---|
| Protein GI | 271965682 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.121217 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0238527 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTACTT ACCGCGAGCT CCTGCGCACG CCGGAGTTCA CTCCGCTCTT CCTGACCGTC
TCCGCGCAGG TGGCGGCCGC GACCGTGAGC GGGCTGGCGC TGGGCGTGCT GGTGTACGCG
GCCACCGGGT CACCGCTGCT GGCCGCCCTC AGCATGTTCG GTCCCTCGCT GGCCCAGGCG
ATCGGCGCGG CCGCGCTGCT GTCGGCCGCC GACCGGCTTC CGCCGCGCGC CGCGATGACG
GGAGTGGCCC TGGCCTTCTG CCTCGGCACC GCCGCCCTGG CCGTGCCCGG GCTGCCGCTG
CCGGGCATAT TCGCGATCAT CCTGGGGCTC GGCCTGGTCG GCTCGGTGGG CGGCGGGGTG
CGCTACGGGC TGCTGAACGA GATCGTGCCC GCGGACGGCT ACCTGCTCGG GCGGTCGCTG
GTCAACATGT CCGTCGGGAT CATGCAGGTC TGCGGGTTCG CGGCGGGCGG CGTGCTGGTG
TCGGTGTTGT CGCCGCGCGG CACGCTGCTG GCCGGGGCCG CCCTGTATCT CGTCGCCGCG
GGCACCGCCA GGTTCGGCCT CAGCGCGCGG GCGCCACGGG CCGTGGGGCG GCCGTCGGTG
GCCGCGACGT GGCGCTCCAA CGTGCGGCTG TGGTCCTCGG CGCCCCGTCG CCGCGTCTAC
CTCGCGCTCT GGGTGCCGAA CGGGCTGATC GTCGGTTGCG AGTCGCTGTT CGTACCGTTC
GCGCCCGAGC AGGCCGGGAC GCTCTTCGCC TTCGCCGCGT CCGGCATGCT GGCCGGGGAC
GTTCTGGTCG GCAGGTTCGT GCCGGCGCGG TGGCAGGCGC GGCTCGGCGC CGCGCTGCTG
CTCCTGCTGG CCGCGCCGTA CCTGGTGTTC GCCGTGGACC CGCCGGTGCC GCTCGCCGTC
GCGGCCGTGA CGGTGGCCTC GATCGGATAC GCGGCGAGCC TGGTGCTGCA GCAGCGGCTG
ATGGACCTGA CCCCGGCCGA GATGAGCGGG CACGCGCTGG GGCTGCACTC CTCCGGCATG
ATCACCATGC AGGGTGTCGC CGCCGCCCTC GCCGGCACGC TCGCTCAGTA CACCTCGCCG
GGGACGGCGA TCGCCGTCAT GGCGGCGGCG TCCGTGACGG TCACGCTGGC GCTGGCGCGC
GGCCTCTCCG GGCCGGCACG CACAGGCCCG TCTCAGAGAG CGCGCGCCGA CATCGAGCGG
CACGGCGACG CCGGGAACCC GGCGGCACCG CCCCAGGCCG GTCACCTCGC CGGGAACGCT
CCGCCGGCCA CCGGAAACCG GCGGACGACG TGA
|
|---|
| Protein sequence | MRTYRELLRT PEFTPLFLTV SAQVAAATVS GLALGVLVYA ATGSPLLAAL SMFGPSLAQA
IGAAALLSAA DRLPPRAAMT GVALAFCLGT AALAVPGLPL PGIFAIILGL GLVGSVGGGV
RYGLLNEIVP ADGYLLGRSL VNMSVGIMQV CGFAAGGVLV SVLSPRGTLL AGAALYLVAA
GTARFGLSAR APRAVGRPSV AATWRSNVRL WSSAPRRRVY LALWVPNGLI VGCESLFVPF
APEQAGTLFA FAASGMLAGD VLVGRFVPAR WQARLGAALL LLLAAPYLVF AVDPPVPLAV
AAVTVASIGY AASLVLQQRL MDLTPAEMSG HALGLHSSGM ITMQGVAAAL AGTLAQYTSP
GTAIAVMAAA SVTVTLALAR GLSGPARTGP SQRARADIER HGDAGNPAAP PQAGHLAGNA
PPATGNRRTT
|
|---|
| |