Gene Sros_4100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4100 
Symbol 
ID8667394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4560123 
End bp4560665 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content74% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003339751 
Protein GI271965555 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.141571 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.294645 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTCAG AGTGTCTGCG CACGCCTTTC TCTCAAGGAA TGTCCGAGAA ACGGAGCCCG 
ATCGAGATGC CTCTCCCCGC ATCACGCCAC GTCGTCGTCG CCCTCGACGG CTCCCCGCGC
TCCATCGCCG CACTCCGCCG TGGCGCGGCG GAGGCGGACA GGACGGGTGC GCAGCTGGTG
GTCGTACACG TCCTGCAGGA CAGGCCTGAC GGTCCCGCCG GCGAGCGGGA GCGCCTCAGC
GCGAGCGAGA CGGAGATGGA CGCGCTCATC GCCGCCACCC TCCGGGGCGG GCCCGCCGCG
ACGGCGCGCA CGGTCGTCGC CTACGGTGAT CCCGCCCGCG TGATCATCCA CCACGCCAGG
CACGCCGACC TGCTGCTGGT CGGCGCCGGG AGCGGCGGGG CACCCCTGAA CGGCTCGACG
CTCGACCCCG TCCTCCAGGA CGGCCCGTGC CCCATCCTGG TCTGCTCGTC CTCGGACAGG
GCGGGCCGGA TGTCGTGGAC GGTCCGGCTG CCCGCGCGGT CCCACGGCCG GCCGGCCTCC
TGA
 
Protein sequence
MASECLRTPF SQGMSEKRSP IEMPLPASRH VVVALDGSPR SIAALRRGAA EADRTGAQLV 
VVHVLQDRPD GPAGERERLS ASETEMDALI AATLRGGPAA TARTVVAYGD PARVIIHHAR
HADLLLVGAG SGGAPLNGST LDPVLQDGPC PILVCSSSDR AGRMSWTVRL PARSHGRPAS