Gene Sros_4096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4096 
Symbol 
ID8667390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4555357 
End bp4555935 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content68% 
IMG OID 
ProductRibD domain protein 
Protein accessionYP_003339747 
Protein GI271965551 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.894169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.813466 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGAAGC TTGTGTACTA CGTCGGCGTC TCCATCGACG GCTACATCTC CGGCCCCGGC 
GGCGAGTGGG AGTTCTTCCC GCTCGGCGAT GACATGGCCG CGTGGATCAA CGCGCGCTAC
CCGGAGACCG TCCCCACCCA TGTCCGTCCC CACGTGGGCA TGGCGGTCGA GGAGCCCAAC
AAGTCCTTCG ACACGCTCGT GATGGGCCGC GGCACCTACG AGCCCGCGCT GGCCGTCAAC
GTGACCAGCC CCTACGCCCA CATGCGCCAG TACGTCGTGT CCACCACCCT CGGCGAGATC
GCCGACCCGT CGGTCGAGCT GGTCACCGCC GACCCGGTCG ACCTGGTCAG GAAGCTCAAG
GCCGAGGAGA CGGGCAAGGA CGTCTGGCTC ACCGGCGGCG GCAAGCTGGC CGGCGCCCTC
CTCCCGGAGA TCGACGAATT GATCATCAAG AGCTACCCGG TGGTCGCGGG CGCGGGCATC
TCCGCCTTCT CCGGCGACTT CCGCCCCACC CTGTTCTCGC CCACCCAGAC CGAGACTTTC
AGCAACGGCG CCAGGGTCAC CTGGTTCACC CGGTCGTGA
 
Protein sequence
MRKLVYYVGV SIDGYISGPG GEWEFFPLGD DMAAWINARY PETVPTHVRP HVGMAVEEPN 
KSFDTLVMGR GTYEPALAVN VTSPYAHMRQ YVVSTTLGEI ADPSVELVTA DPVDLVRKLK
AEETGKDVWL TGGGKLAGAL LPEIDELIIK SYPVVAGAGI SAFSGDFRPT LFSPTQTETF
SNGARVTWFT RS