Gene Sros_3935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3935 
Symbol 
ID8667225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand+ 
Start bp4383335 
End bp4383886 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content74% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003339592 
Protein GI271965396 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.53611 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00874096 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGGGCCA TGACCGACGA CACCGTCATC AACGAGCCGT CCCTGACCGC CGGCGAAGTC 
GAGATGCTGC TGTTCGCCCT CGACCGCTCC CGTGCCACAT TCGCCTGGAA GACCGGCGGC 
CTGGACGCCG GCGCCCTGAA CCGGCCGCAC CCGCCGAGCA CGATGACCCT GGCCGGGTTG 
ATCAAGCACC TGACCCGGGT CGAGGAAGAG ACGGCGGCCT GGCGCCTGTT CGGGGAGCGG 
CCCGCGCCGC CCTGGGACAC CGCCGAACAC GGCTGGGAAT GGGAAGCCGC CGCCGCCGAC 
ACGCCCGACG AGCTCTACAC CCGCTGGCGC GAGGCCGTCG CCCGCACCCG GGCCGCCGTG 
GCCGAGGTGC TGGCCGACGG CGGCCTCGAC CGGCCCGCCG GGTTCACCGT CACCGAGGAC 
GGCCGATCGC CCAACGTGCG CCGTATCCTG GTCGACGTCC ACGACGAATA CGCCCGGCAC 
GTCGGCCACG CGGACCTGTT CCGCGAGGCG ATCGACGGCC TGGTGGGCGA GGACCCGCCC 
CAGCCGGACT AG
 
Protein sequence
MRAMTDDTVI NEPSLTAGEV EMLLFALDRS RATFAWKTGG LDAGALNRPH PPSTMTLAGL 
IKHLTRVEEE TAAWRLFGER PAPPWDTAEH GWEWEAAAAD TPDELYTRWR EAVARTRAAV 
AEVLADGGLD RPAGFTVTED GRSPNVRRIL VDVHDEYARH VGHADLFREA IDGLVGEDPP 
QPD