| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_3802 |
|---|
| Symbol | |
|---|
| ID | 8667092 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 4241638 |
|---|
| End bp | 4243485 |
|---|
| Gene Length | 1848 bp |
|---|
| Protein Length | 615 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | lipid A export ATP-binding protein |
|---|
| Protein accession | YP_003339465 |
|---|
| Protein GI | 271965269 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.360172 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.799293 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCCTG ATACCGCCCC CGAGCGAGAT ACCGAGACCG GTCAGTCCCC CACCCCCCGC
CCGCGCAGCC TCAGGACGAG CTCGCTGTGG CGGATGAAGT CCTACCTCCG TCCCTACACC
ACCCGCCTGC TGCTCATCTG GCTACCGGCC TTCGGCGGGA TCGCCATCGG CATCGTCATC
CCGCTGATCG GCAAGGAGAT CATCGACGGC CCCGTCGCCC GCGGCGACGC CGGAGCCCTC
CTCCCCCTCG CACTGCTCGC CCTGGCCCTG GGCGTGATCG AGGCGCTGCT CATCTTCCTG
CGAAGGTGGT TCCTGGCCGA TGCCGTCATC GGCCTGGAGA CGACGATCCG CGACGACCTC
TACCGGCACC TGCAGCGGCT GCCGATGAGC TTCCACGGCG CCTGGCAGTC CGGCCAGCTG
CTCTCCCGCG CGACGACCGA CCTGTCGGTC ATCCGGCGCT TCCTCGGCTT CGGCATGCTC
TTCCTCGTCC TGATCATCTT CCAGATCGTG ACGGTGACGG GGCTGCTGCT GCAGATGTAC
TGGCCGCTCG GCCTGCTGGT CGCCGCGGCG GCGATCCCGG TCGTGGTCAC CTCGCTGCGC
TTCGAGCGGG GCTACATCAC CGTCTCCCGC CAGGTCCAGG ACGAGCAGGG CGACCTCGCC
ACCGTGGTCG AGGAGTCCGC GGTCGGCATC CGCACGATCA AGGCCTTCGG CCGCGGCCGC
CACGTCTACG ACACCTTCGA CGACGGGGCC CGCAAGGTCT ACCGGACCTC GATGGAGAAG
GTACGGCTGT CGGCCAGGTT CTTCACCTTC CTGGAGGTGA TCCCGAACGT CACCCTCGCC
GTCGTGCTGC TGCTGGGCGC CCTCGCGGTC GGCTCGGGCT CGCTGACGCT GGGCACCCTG
GTGGCCTTCA CCACGCTGAT GCTGCAGCTC GTGTGGCCCG TCTCGGCTCT CGGCTTCATC
CTGGTCATGG CCCAGGAGGC GATGACCTCG GCCGACCGGG TGATGGAGGT GCTCGACACC
GACCCGGAGA TCGCCGGCGG CCTGGACGTG GTCGAGCGCC CCCGCGGCCA CCTGCGCTAC
GAGGGCGTGG AGTTCCGCTT CCCCGGGGCC GCCGAGCCGG TGCTCCGCGA CGTCTGGCTG
GACGTGCGGC CGGGAGAGAC GGTCGCGGTC GTGGGCGCGA CGGGTTCGGG AAAGACCACC
CTGACCTCCC TCGTCCCCCG GCTGTACGAC GTCAGCGCGG GCCGGGTCAC GATCGACGGG
CACGACGTGC GGGACCTGTC GCTGCCCGTC CTGCGCTCGA TGGTCGCCAC GGCCTTCGAG
GAGCCGACCC TGTTCTCCAT GAGCGTCAGG GAGAACCTCA CGCTGGGGCG GCACGACGCC
ACCGACGAGG AGATCGAGGA GGCGCTGCGG GTCGCCCAGG CCGGGTTCGT CCACCAGCTG
CCGTGGGGGC TGGAGACCAG GATCGGCGAG CAGGGCATGT CCCTGTCCGG CGGCCAGCGC
CAGCGCCTCG CCCTGGCCCG TGCGGTCCTC AGCCGGCCGA GGGTCCTCGT GCTGGACGAC
ACCCTGTCGG CCCTGGACGT CGAGACCGAG GCCCTGGTGG AGGAGGCCCT GCGGCATGTC
CTGCGGGACG CCACCGGGAT CGTGGTGGCG CACCGCGCCT CCACCGTGCT GCTCGCCGAC
AAGGTGGCCC TGCTGCTGAA CGGCACGATC GCGCACGTCG GCCGCCACCA GGAGCTGATG
GCGGGCGTGC CGGAGTACCG GGCGCTGCTG TCGGCGGAAC TGGACGGCGA CCCCGACGGG
CTGGACGGGC TGGACGGCGA CCTGGACAGC GAGGGGGCCC TCCGATGA
|
|---|
| Protein sequence | MPPDTAPERD TETGQSPTPR PRSLRTSSLW RMKSYLRPYT TRLLLIWLPA FGGIAIGIVI
PLIGKEIIDG PVARGDAGAL LPLALLALAL GVIEALLIFL RRWFLADAVI GLETTIRDDL
YRHLQRLPMS FHGAWQSGQL LSRATTDLSV IRRFLGFGML FLVLIIFQIV TVTGLLLQMY
WPLGLLVAAA AIPVVVTSLR FERGYITVSR QVQDEQGDLA TVVEESAVGI RTIKAFGRGR
HVYDTFDDGA RKVYRTSMEK VRLSARFFTF LEVIPNVTLA VVLLLGALAV GSGSLTLGTL
VAFTTLMLQL VWPVSALGFI LVMAQEAMTS ADRVMEVLDT DPEIAGGLDV VERPRGHLRY
EGVEFRFPGA AEPVLRDVWL DVRPGETVAV VGATGSGKTT LTSLVPRLYD VSAGRVTIDG
HDVRDLSLPV LRSMVATAFE EPTLFSMSVR ENLTLGRHDA TDEEIEEALR VAQAGFVHQL
PWGLETRIGE QGMSLSGGQR QRLALARAVL SRPRVLVLDD TLSALDVETE ALVEEALRHV
LRDATGIVVA HRASTVLLAD KVALLLNGTI AHVGRHQELM AGVPEYRALL SAELDGDPDG
LDGLDGDLDS EGALR
|
|---|
| |