Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_3714 |
Symbol | |
ID | 8667002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 4114479 |
End bp | 4115531 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | Geranylgeranyl pyrophosphate synthase-like protein |
Protein accession | YP_003339380 |
Protein GI | 271965184 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000327917 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.60035 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTGTGG TGACGACCGC ACCAGTGCTC GGCTTCACCG ACAGCACCAC GCGATCGGCA CATGAGGTAC TGGCCGCGGC CCAGGAGCTG GCCGGACCGG CTCACCGCGG CGCGGTGGAC CGCCTGCCGG AGGAGATCCG CCACATCGCC GGCTACCACG CGGGCTGGTG GGACGCCGAA GGCCGCCCGC GGCAGGGCGG CGGCAAGGCG GTCCGGCCGG CCCTGGTGCT GGCCTCGGCG TGGGCGGCCG GCGGCGAGGA CGCGGAGACC GTCCGGGCGG CGGTGCCGGC CGCGGTCGCG GTGGAGCTGG TCCACGACTT CTCCCTGCTG CACGACGACA TCATGGACGG CGACCTGACC CGCAGGCACC GGCCGGCCGC GTGGTCGGTG TTCGGGGTCG GCGAGGCCAT CCTGGCCGGC GACGTGCTGC TGACCCTCGC CCTGGACCTG CTCGCCGGGA GCCCGGGCCT GAGGGTGCTG ACCGGCTCGC TGCTACGGCT GTGCTCAGGG CAGAGCGCCG ACCTGGCGTT CGAAACCCGT ACCGACGTCA CCCTCGCCCA GTGCGTCGAG ATGGCCGCGG GCAAGACCGG GGCGCTGCTG GGCTGCGCCT GCGAGATCGG CGCGCTGGCC GGTGGCGCCG GCCAGGACCG CGCCGGGCTG TTCGGGCGGT TCGGCCACCA TCTCGGGCTG GCCTTCCAGC TCACGGACGA TCTCCTGGGG ATCTGGGGGG ATCCCGCCGT CACCGGCAAA CCCGTCTTCT CCGACCTGGC CGCCCGCAAG AAGTCCCTGC CGGTGGTCGC CGCCCTCACC TCGGGCACCC CCGCGGGCGA GCGGCTGGCC CGGCTCTACC ACGGCGACCG GATCCTGGAC GAGCGGTCCC TCGCCCATGC CGCCGACCTC ATCGAGGCGG CCGGTGCCCG CGCCTGGGCG CAGCGGGAGG CCGAGGCCAA CCTCGCCGCC GCGCTGGCCT GCCTGCGGCA GGCCGACCCC GCCCCGGAAG CGGCCGGCGA CCTCCGCCTG CTGGCCCAGC TGATCACCCG GCGGGACCGC TGA
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Protein sequence | MSVVTTAPVL GFTDSTTRSA HEVLAAAQEL AGPAHRGAVD RLPEEIRHIA GYHAGWWDAE GRPRQGGGKA VRPALVLASA WAAGGEDAET VRAAVPAAVA VELVHDFSLL HDDIMDGDLT RRHRPAAWSV FGVGEAILAG DVLLTLALDL LAGSPGLRVL TGSLLRLCSG QSADLAFETR TDVTLAQCVE MAAGKTGALL GCACEIGALA GGAGQDRAGL FGRFGHHLGL AFQLTDDLLG IWGDPAVTGK PVFSDLAARK KSLPVVAALT SGTPAGERLA RLYHGDRILD ERSLAHAADL IEAAGARAWA QREAEANLAA ALACLRQADP APEAAGDLRL LAQLITRRDR
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