| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_3646 |
|---|
| Symbol | |
|---|
| ID | 8666934 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 4041737 |
|---|
| End bp | 4042519 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | transposase, IS4 family |
|---|
| Protein accession | YP_003339318 |
|---|
| Protein GI | 271965122 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCTGTCTT ACCGTGCCTC GATTCCACTG TCCAACCACA CCCTGATTCG CCTGGCCGAA
CTCATCCGCA CCCGGCACGC CGAACGTCGC TCCCGGTGGC GGAAGTTAGA TTCGGCGCAG
CAGGCGCTAC TGGTCCTGGC CCATTTACGC AATGGCGACA CCTACGCCCG CCTGGCCGCC
GGTTTCGCCG TAGGGACCAC CACGGCCTGG CGCTATGTTC GCGAAGCCGT CGATCTCCTG
GCCGCCCTGG CCGACGACGT GCACGCCGCC GTCGAGCGCG CATCCCGGCT GGCCTACACC
ATCCTGGACG GCACTCTCAT TCCGATTGAC CGCCTCGCCG ATGAGCGGCC GTATTACAGC
GGCAAACACA AGCGGCATGG AATGAACGTG CAACTGCTGG CCGACCCCAT GGGCCGATTG
GTGTGGGCCT CGCCCGCGTT GCCGGGCGCC GCGCACGACG TGAGCGCCGC CCGGAAGGTC
GGCCTAATCG ACGCCTTGAC CAGCGCCGGC GTGAAGACCT TTGCGGACAA GGGTTATCAA
GGCGCGGGCG CCATGATTCG GACGCCGTTC AAGCGACATC GCCATCGGCC CTGGTTGTCG
CGCGGGCAGC GGGACGTCAA CCGCGCCCAC GCCCGTATCC GGGCCATCGG TGAGCGTGCC
GTCGCGACCT TGAAGGGCTG GAAGGTGCTT ACTAGGCTGC GCTGTTGCCC GCATCGAGCG
ACAGCGTTCG TGCAGGCGAT CTTTGTGCTG CAGCTCGTGG AAGAAGGCCG CTACTCAGGA
TGA
|
|---|
| Protein sequence | MLSYRASIPL SNHTLIRLAE LIRTRHAERR SRWRKLDSAQ QALLVLAHLR NGDTYARLAA
GFAVGTTTAW RYVREAVDLL AALADDVHAA VERASRLAYT ILDGTLIPID RLADERPYYS
GKHKRHGMNV QLLADPMGRL VWASPALPGA AHDVSAARKV GLIDALTSAG VKTFADKGYQ
GAGAMIRTPF KRHRHRPWLS RGQRDVNRAH ARIRAIGERA VATLKGWKVL TRLRCCPHRA
TAFVQAIFVL QLVEEGRYSG
|
|---|
| |