| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_3561 |
|---|
| Symbol | |
|---|
| ID | 8666849 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 3948345 |
|---|
| End bp | 3949175 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | conserved hypothetical protein LmbE |
|---|
| Protein accession | YP_003339238 |
|---|
| Protein GI | 271965042 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.532852 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.20928 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGACG AGCTGACACT GATGGCCGTC CACGCCCATC CCGACGACGA GGTGCTCGGG
ACGGGCGGCC TCTTCGCCCG GTGCGCCGAC GAGGGCATCC GCACGGTCCT GGTCACCTGC
ACGAACGGCG AGCAGGGTGA CGGTCCCGGC GGGGTGAAAC CGGGGGAGCC GGGCCACGAC
GAGGACGCGG TGAGCGCGCA GCGGCTGGAG GAGCTCCGCG AATCCGTGGC CCACCTCGCG
ATCGACCACC TGGAGCTGCT CGGCTACCGC GACTCCGGCA TGGTCGGCTG GGCGGCCAAC
GAGGCGCCGG AGGCCTTCGC CAACGTCCCC GTCGACCAGG CCGCCGGGCG GCTCGCCGCG
TTGATGGAGC GCTACCGGCC GCAGGTCGTC GTCACCTATG ACGAGAACGG CGGCTACGGC
CACCCCGACC ACATCCAGGC GCACCGGATC ACCCTCGCCG CGGTCGAGGC CGGCGGCATC
CCCAGCAAGC TCTACTACAC CGCGGTGCCC CGCGAGCGGG TCGCCGAGCT GTTCGCCTAC
CTCCGCTCGA CCGGCGCCGC CCCCGAGGAC CTGGAGCTCC CCCCGGACTT CGGCACCCCG
GACGAGCAGA TCACCGCCGT GGTCGACGTG GCCCCCTACG TCGAGCGCAA GCTCAAGGCG
CTGGAGGCGC ACGCGAGCCA GGGGGAGAAC ATCTTCCTGC TGCGCATGCC CGCCGAGGCG
CAGCACCGGG CGCTCGCCGA GGAGGCCTTC ACCCGCCACC TCAGCCGCGT CCCCGCCGCC
GACCGCGAGG ACGACCTCTT CGACGGCCTG CGCCGGGACG CCGCCGAATG A
|
|---|
| Protein sequence | MDDELTLMAV HAHPDDEVLG TGGLFARCAD EGIRTVLVTC TNGEQGDGPG GVKPGEPGHD
EDAVSAQRLE ELRESVAHLA IDHLELLGYR DSGMVGWAAN EAPEAFANVP VDQAAGRLAA
LMERYRPQVV VTYDENGGYG HPDHIQAHRI TLAAVEAGGI PSKLYYTAVP RERVAELFAY
LRSTGAAPED LELPPDFGTP DEQITAVVDV APYVERKLKA LEAHASQGEN IFLLRMPAEA
QHRALAEEAF TRHLSRVPAA DREDDLFDGL RRDAAE
|
|---|
| |