Gene Sros_3550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3550 
Symbol 
ID8666838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3934300 
End bp3935424 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content77% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003339228 
Protein GI271965032 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0101342 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCGGC TCAACCGGGC GGAGCTGCAG GAACGCAACC GCGCCAAGGT GCTTGCCGCG 
GCCCTGGAGG AGTTCACCGA GCGCGGCTTC CGCGACGCCA AGATCGACGG CATCGCCGAG
CGCGCCGAGC TCACCCGCGG CGCTGTCTAC TCCAACTTCC CCGGCAAGCG GGCTCTCTAC
TTCGCCGTCC TGGCCGACCT CGCCGAGCGC GCACCCGAGC CGCCGCACCC GGTGCCGGAC
CGCACCGCCC GGGAGGCGCT CAGCGCGTTC GCCCGCGCCT GGGTCGCCCG GCTCCCCCTC
GCCACCGACG GGCAGCACGG CCCCGCCCGG CTCGGCATGG ACCTGATGTC CGAGGTCATC
GTCGACGAAC GGACCCGGCG GCCGTTCACG CAGCTGATGA AGCTCGACGC GATCCTGCTC
GGACTGGCCC TGGAGTGGCT GCGCCCGCCG GCGACCTCCA CCGGCCGCAT GGTGTGCGTG
GCCGAGGCCG CGCTCACGAC CCTGCACGGC GCGAGCCAGA TGGCCGCCGC CGCGCCCGGC
TTCATCGAGC CCTTCAACGT CGTCGGCATC TGCGAGCAGC TCGTGGACCT CGATCTGGGC
GACGTGTGGC AGCCCCCGCA CGTTCCGTAC ATCCCGCAGG CCCGGCCTGC CGACGAGCCG
TGGTCCCCGC CGCCCGCCGT GGACGTCATC CGTGGCGGCC CGGCGCGGCT CGCGGGCGAC
GGCGTGGTGG CGGTCCTCGG GCTGCACCGG CTTGAGGCCG CGGAGGAGGC GGTACGGACC
GCGGCGCCCG GGGCCACGGT CACCGCCGTC CTGGTCACCG GTGACCCCGG CGAGCTGGCG
CCGCTGGCAC GGCTGGCCAT CGCCGACCTC TGCAACTGCC TGCGCCAGGC CTTCCCCCCG
GCGGCCTGGC CGCGCCTGCA GGTGGTCTAC GACGAGTCCG GCACCCTCGC CGCGGCGGCG
GGTGTGCCCG CCGTCAGCGA CGGGACCGAG GTCGCCGTCC GCGTCGAGGC GGGCCGGATC
GTCGCCCGAG CCGACGGCCG CGGCGCCTGC CACGCGGCCG CGTCGGCCGG CGGGGCCGCG
CCGGCCGCCC GGCCCCAGCC GTCGCCGACG AGACAGCACA GGTAG
 
Protein sequence
MGRLNRAELQ ERNRAKVLAA ALEEFTERGF RDAKIDGIAE RAELTRGAVY SNFPGKRALY 
FAVLADLAER APEPPHPVPD RTAREALSAF ARAWVARLPL ATDGQHGPAR LGMDLMSEVI
VDERTRRPFT QLMKLDAILL GLALEWLRPP ATSTGRMVCV AEAALTTLHG ASQMAAAAPG
FIEPFNVVGI CEQLVDLDLG DVWQPPHVPY IPQARPADEP WSPPPAVDVI RGGPARLAGD
GVVAVLGLHR LEAAEEAVRT AAPGATVTAV LVTGDPGELA PLARLAIADL CNCLRQAFPP
AAWPRLQVVY DESGTLAAAA GVPAVSDGTE VAVRVEAGRI VARADGRGAC HAAASAGGAA
PAARPQPSPT RQHR