| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_3532 |
|---|
| Symbol | |
|---|
| ID | 8666820 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 3915067 |
|---|
| End bp | 3917580 |
|---|
| Gene Length | 2514 bp |
|---|
| Protein Length | 837 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003339211 |
|---|
| Protein GI | 271965015 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.037259 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGGTC TCGCGGGACC GATCGCGGTA GGCGTCGAGG AGGAGTTCCA CGTCGTCGAC
GTCGACACCC GGCACCTCGT CCCCCGGGCC GGCGTGCTGC TGGACCAGTT ACCGGCGGAC
CGGTTCACCC ACGAGCTGCA GCGTTCGGTG GTGGAGGCCA ACAGCAGGCC CTTCATCCGG
CTGGAGGACC TCGGGCACGA CCTGACCGCG CTGCGGCGCA CGGTGATCCA GGCGGCGGAC
GGCCTGGGCC TGGGGATCGT GGCGGCCGGG AGCGTGCCGC TGGTGGACCT GGAGGCGCTG
AAGATCTCCC CGGACCCGCG CTACGAGCAG ATGCTCGCCG ACTACCAGCT GCTCACCCGC
GAGCAGCTGA TCTGCGGGAC CCAGGTGCAC GCCGAGGTCG ACAACCGCGA CCTGGCCGTC
GCCGTCGCCC ACCGCCTGGC TCCCTGGCTG CCTCCGCTGC TCGCCCTGAG CTCCAGCTCG
CCGTACTGGC TGGGGTCCGA CACCGGATAC GCCAGCTACC GCCCGCTCAT CTGGCAGCGC
TGGCCGACCG CCGGGCCCGT CGCCGCGTTC GAGTCGGCCG CGGAGTACGA CCAGGTGGTC
GGTGACCTCG TGCGGTCAGG CGTGATCACC GATCCCGGCA TGATCTACTT CGACATCCGG
CCCTCGGCGC ACGTCCCCAC CGTCGAGCTG CGGATATGCG ACGCCTGCCC CCGCGTGAGC
GACATCGTGC TGATAGCCGG GCTGTTCCGG GCGCTGGTGG CCCGGGAGCT GGAGGCCGTC
CGGCGCGGGC CCGACCGCTC GGTCCGGCTG GAGATGGTAC GCGCCGCGAC GTGGCGGGCG
GCGCGCTCCG GGCTGGAGGG CGACCTCGTC GACCCGGTCG AGGGCGTGCC GAGACCGGCC
GCCGAGGTGA TCGGGCGGAT GGTGGACGGC CTGCGGCCGC AACTGGAGGA GTCCGGCGAC
CGGGAGCTCG TCACGTCCCT GGCCCAGCAG GCACTGGGGC GGGGAAGCTC CTCGGCCCGC
CAGCGCAGGG CGTTCGTCCG CGGCGGCCGG CTGGCCGACG TGGTCGACCT CCTCGTCGCC
GAGACGCGCT CCGAGGAGTG GGAGACCGCC TTCGGCGGGC TGACGCCGCG GATGCGTACC
AGCCTGCTCG ACGGCTACGA CGCCCCCGGC GACGAGGCGA TCATCGAGGG CACGGTGCGC
GAGCCCTACC AGCCGGTCCT GCGGACCCTC GACCGCCTGG GCCCCGACGG CCTGCGCGAC
AGGCAGGAGC GGCGCGACCG CCACCAGCGC CGCAACGGCA TGACCTTCCA GGTGGAGGGC
GAGGACGAGA GCCGGATCTT CCCCTTCGAC CTGGTCCCGC GGCTGGTCCC GCCCGGCGAG
TGGGCCGAGA TCCAGCGGGC GTTGCCCCAG CGGGTGCGCG CGCTGGAGGC GTTCCTGCAC
GACGTGTACG GCGGGCGCCA GATCATCGGG GACGGCGTGC TCCCCGCCTG GGTGGTCGAC
GAGTCGCCCG GCTACCGGGG ATCCGGGCGG CGGATACCGG CCGGCACCGT GCGCTGCGCC
GTGGCCGGGC TGGACCTGGT CCGCGACGAC GTCGGCCGGT GGGCGGTGCT GGAGGACAAC
CTCCGGGTGC CCTCCGGCAT CGGGTACGCC GTGGCCAACC GGCGCCTGAT GGCCGAGGTG
CTGCCCGAGC TCGTCCCCGG CCCGGAGTTC GCCGACCCGC AGGAGGGCCT GCGGGTGCTG
CGGGAGACCC TGCTGGCGGC GGGCACGGGC GACCCGCGGA CCCTGGCCGT GGTCTCCGGG
GGGCCGGACG ACTCCGCCCA CTACGAGCAC CGGATGCTCG CCGAGGAGCT GGGGGCGATC
CTGGCCGGTC CGGCCGACCT GCGCGTCAGG AACGGGCACG TCGAGGCCGC CGGTCGCCGG
ATCGACGTGC TCTACCGCCG GGTCGACGAG AACGACCTGC TCGCCGGTCC CCTCGGGCAG
GAGATCCTGG AGGCCGCCGA ACGCTCCGCG GTCGTCCTGG CCAACGCGCC GGGCAACGGG
GTCGCCGACG ACAAGTGCCT GTACCGGTAC GTGCCCCGCC TCATCGAGTA CTACCTGGGC
GAGCGGCCGC TCATCGACAA CGTCACCACC TATCTGTGCC GGGACGACGG CGACCGGGAG
CAGGTGCTGG ACCGGCTGGC CGAGCTGGTG GTCAAGCCGG TGGACGGGTT CGGCGGGCAG
GGGGTGGTCG TCGGCCCCGA CGCCTCCCCC GAGGAGCTCC GCGAGGCCCG GGACAGGATC
CTCGCCTCGC CCGACCGGTG GGTCGCCCAG GAGACGGTCC GGCTGTCGAC CCATCCGGCC
TTCGACGGGC GGCGGCTGAG CCCGCGCGTC GTCGACCTGC GGGCCTTCGT CTGCCTGGGA
GAGACGGCGG TGGTGCCTCC CGCGGCGCTG ACCCGCGTCG CGCCGGCCGA CAGCATGATC
GTCAATTCCT CCCAGGGTGG GGGTTCCAAG GACACGTGGC TTCCGAGGGG ATGA
|
|---|
| Protein sequence | MAGLAGPIAV GVEEEFHVVD VDTRHLVPRA GVLLDQLPAD RFTHELQRSV VEANSRPFIR
LEDLGHDLTA LRRTVIQAAD GLGLGIVAAG SVPLVDLEAL KISPDPRYEQ MLADYQLLTR
EQLICGTQVH AEVDNRDLAV AVAHRLAPWL PPLLALSSSS PYWLGSDTGY ASYRPLIWQR
WPTAGPVAAF ESAAEYDQVV GDLVRSGVIT DPGMIYFDIR PSAHVPTVEL RICDACPRVS
DIVLIAGLFR ALVARELEAV RRGPDRSVRL EMVRAATWRA ARSGLEGDLV DPVEGVPRPA
AEVIGRMVDG LRPQLEESGD RELVTSLAQQ ALGRGSSSAR QRRAFVRGGR LADVVDLLVA
ETRSEEWETA FGGLTPRMRT SLLDGYDAPG DEAIIEGTVR EPYQPVLRTL DRLGPDGLRD
RQERRDRHQR RNGMTFQVEG EDESRIFPFD LVPRLVPPGE WAEIQRALPQ RVRALEAFLH
DVYGGRQIIG DGVLPAWVVD ESPGYRGSGR RIPAGTVRCA VAGLDLVRDD VGRWAVLEDN
LRVPSGIGYA VANRRLMAEV LPELVPGPEF ADPQEGLRVL RETLLAAGTG DPRTLAVVSG
GPDDSAHYEH RMLAEELGAI LAGPADLRVR NGHVEAAGRR IDVLYRRVDE NDLLAGPLGQ
EILEAAERSA VVLANAPGNG VADDKCLYRY VPRLIEYYLG ERPLIDNVTT YLCRDDGDRE
QVLDRLAELV VKPVDGFGGQ GVVVGPDASP EELREARDRI LASPDRWVAQ ETVRLSTHPA
FDGRRLSPRV VDLRAFVCLG ETAVVPPAAL TRVAPADSMI VNSSQGGGSK DTWLPRG
|
|---|
| |