| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_3516 |
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| Symbol | |
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| ID | 8666804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptosporangium roseum DSM 43021 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013595 |
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| Strand | + |
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| Start bp | 3891922 |
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| End bp | 3894480 |
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| Gene Length | 2559 bp |
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| Protein Length | 852 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | Microbial collagenase |
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| Protein accession | YP_003339195 |
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| Protein GI | 271964999 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGATTCA CACCGTCCCT GCGCGCGTTC GGAAAACATC TGCCCGCACT GCTCGCACCC
GTGCTGGGCC TGGGACTCGT CCTCCAGCCG CTGGTGGCCT CGCCCGCCGC TGCCGCCACC
GCTCCGCAGC CCCCGTCCGT CGGGGTGCGC GCCGCCGACG ACGGATCGCA GCACGTCCAG
GCGTCCCCCC TGGCGGTCAA GGAGCGCCCG CCGCTGTCGG CCTCGAAGGA CGCGCTCCGG
CGCGACCTCG ACAAACCCAC GCCCACGCCG GAACATCCGA GGCCCTCGGC GAAGACCGAC
AAATCCGCCA AGTCGACCGC CGCGGCGGCC GCGTGCAGCG CGAGCGACTT CACCAGCCGC
TCCGGAAGCG CCCTCGTCCA GCAGATCAAG GCCTCGACCA CCGAGTGCGT CAACACCCTG
TTCAACCTGA CCGGCGGCGA CGCCTACTAC GCGTTCCGCG AGTCGCAGAT GACCAGCGTC
GCCTACGCGC TGCGCGACAA CGCCGCCTCC TACCAGGGAG ACAACAGCAC GAGCACCGCC
CAGCTCGTGC TCTACCTGCG CGCCGGCTAC TACGTGCAGT GGTACCACCC CTCCACCGTG
GGCACCTACG GGCCCTCCCT GAAGACCGCC ATCCAGTCCG GACTCGACGG ATTCTTCGGC
AACTCCCGGT CCTCGACCGT CAGCGACGCC AACGGCGAGA TCCTCGCCGA GGCCGTCACC
CTGATCGACA GCGCCCAGGA GAACGACCGC TACCTCCACG TCGTCAAGCG GCTGCTCAAC
GGCTACAACA GCTCCTACGA CGCCAGCTGG TGGATGCTCA ACGCGGTCAA CAACGTCTAC
ACGGTGCTCT TCCGCGGCCA CGAGGTTCCG GCGTTCGTCA CCCTGGTCAA GTCCGACCCG
AGCGTCATCG ACACCCTCAA CACCTTCGCG CTGAACCACC TCGACCTGCT CGGCACCGAC
CGTGACTACC TGACCGCCAA CGCCGGCCGG GAGATCGGGC GCTTCCTCCA GCACTCCACG
CTGCGGGCCA AGGTCCGGCC GATGGCCAAG GACCTGCTCA CCCGTAGCAA CATCACCGGG
ACGACCGCCC CGCTGTGGGT CGGCGTAGCC GAGATGACCG ACGCCTACGA CAAGGCCAAC
TGCGCCTACT TCAACACCTG CAACCTCCAG CAGGTCCTCG CGCAGACCAT CCTGCCCGTC
AACCACACCT GCAGCCCCAG CATCAAGATC CGCGCCCAGG CGATGACCTC CGCGCAGCTC
GCCGACAGCT GCACCAGCCT CATCAACCAG GACGCGTACT TCCACAACGT GGCCAAGGAC
GGCAACCGCC CGGTCGCCGA CGACAACAAC ACCACGATCG AAGTCTGCAT CTTCGACTCG
AGCACCGACT ACCAGACCTA CGCCGGTGCG ATGTTCGGCA TCAGCACCAA CAACGGCGGG
ATGTACCTGG AGGGCAACCC GGCCGCCGCG GGCAACCAGC CGCGCTTCAT CGCCTACGAG
GCCGAATGGG TACGGCCCGC CTTCCAGGTC TGGAACCTGA ACCACGAGTA CACCCACTAC
CTCGACGGCC GGTTCAACAT GTACGGCGAC TTCGAGGACG GCGTCACCAC CCCGACCATC
TGGTGGATCG AGGGCTTCGC CGAGTACATC TCCTACTCCT ACCGCAAGGA GACCTACGAC
GCCGCGATCA CCGAGGCGGC CAGGCAGACC TACGCGCTCA GCACGCTGTG GGACACCACC
TACGACAACG ACACGACCCG CATCTACCGC TGGGGCTACC TGGCGGTGCG GTACATGCTC
GAGAAGCACC CCGCTGACGT CGCCACCGTC CTCGGCCACT ACCGGACCGG CGGCTGGAAC
TCCGCCCGGA ACTTCCTGAC CTCGACGATC GGCACCCGCT ACGACAGTGA CTGGCGGACC
TGGCTGACGG CGTGCGCGTC GGGCGGCTGC GCGGGCGGAG GCGGCGGCAA CCAGGCGCCG
AGCGCGAACT TCACCTTCAC CGTCAACGGC CTCGCCACCA CCTTCACCGA CACCTCGACC
GACTCGGACG GGACGATCGC GTCGCGCCAG TGGAACTTCG GCGACGGCAC CTCGTCGACC
TCGGCCAACC CCTCGCACAC CTACACCACC GCGGGCACCT ACACGGTGCA GCTGACCGTC
ACCGACAACG CCGGCGCCAC CGCCACCGCG GGCAAGCAGG TCGTGGTGAC CTCCGGTGGG
TCCTCCGCCC CCGAATGCAC CGCCGGCAGG ACCGACGAGC TCGGCCGGAA CTGCAAGCGC
AGCAACCTGT CAGCCGCCGC CGGCGAGTAC AAGTACCTCT ACCTGTACGT CCCGGCCGGC
ACCGCCAAGC TGACCATCAC CTCCTCCGGC GGCACCGGAA ACGCCAACCT CTACTACAGC
CCCACCTCCT GGGCCACCAC GTCGACCCAC ACCCAGCGGT CGACCAACGC GGGCAACGGC
GAGACCCTGA CCATCACCAA CCCCCCGACC GGCTACAACT ACATCAGCCT CCACGCGGCA
CAGGCCTTCG CCGGAGCCGC GCTCCAGGTC GACTACTGA
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| Protein sequence | MRFTPSLRAF GKHLPALLAP VLGLGLVLQP LVASPAAAAT APQPPSVGVR AADDGSQHVQ
ASPLAVKERP PLSASKDALR RDLDKPTPTP EHPRPSAKTD KSAKSTAAAA ACSASDFTSR
SGSALVQQIK ASTTECVNTL FNLTGGDAYY AFRESQMTSV AYALRDNAAS YQGDNSTSTA
QLVLYLRAGY YVQWYHPSTV GTYGPSLKTA IQSGLDGFFG NSRSSTVSDA NGEILAEAVT
LIDSAQENDR YLHVVKRLLN GYNSSYDASW WMLNAVNNVY TVLFRGHEVP AFVTLVKSDP
SVIDTLNTFA LNHLDLLGTD RDYLTANAGR EIGRFLQHST LRAKVRPMAK DLLTRSNITG
TTAPLWVGVA EMTDAYDKAN CAYFNTCNLQ QVLAQTILPV NHTCSPSIKI RAQAMTSAQL
ADSCTSLINQ DAYFHNVAKD GNRPVADDNN TTIEVCIFDS STDYQTYAGA MFGISTNNGG
MYLEGNPAAA GNQPRFIAYE AEWVRPAFQV WNLNHEYTHY LDGRFNMYGD FEDGVTTPTI
WWIEGFAEYI SYSYRKETYD AAITEAARQT YALSTLWDTT YDNDTTRIYR WGYLAVRYML
EKHPADVATV LGHYRTGGWN SARNFLTSTI GTRYDSDWRT WLTACASGGC AGGGGGNQAP
SANFTFTVNG LATTFTDTST DSDGTIASRQ WNFGDGTSST SANPSHTYTT AGTYTVQLTV
TDNAGATATA GKQVVVTSGG SSAPECTAGR TDELGRNCKR SNLSAAAGEY KYLYLYVPAG
TAKLTITSSG GTGNANLYYS PTSWATTSTH TQRSTNAGNG ETLTITNPPT GYNYISLHAA
QAFAGAALQV DY
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