Gene Sros_3510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3510 
Symbol 
ID8666798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3884921 
End bp3885910 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content71% 
IMG OID 
ProductABC transporter membrane spanning protein (oligopeptide) 
Protein accessionYP_003339189 
Protein GI271964993 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTCT ACGCGCTGCG GCGGCTCGCC GCGGTGGCGG GCGTGCTGCT GGTCATCTGC 
GCGGTGACCT TCGCCATCTT CTACGTGCTC CCCTCGGACC CGGCCGCCCA CGCCTGCGGC
AAGACCTGCA CCCCCGAGCA GGTGACGCTG GTCCGCGAGC AGATGGGCCT GGACCGGCCG
GTGCACGAGC AGTTCGGCGG CTACGTGGCC GGCATCTTCG CCGGCCGTAC GCTGGGCACC
GGCCCGGCGG CGCTGGAGTG CTCCGTCCCC TGCTTCGGCT ACTCCTACCA GAACGCCCTT
CCCGTCTGGG ACCTGCTGAC CGACCGGCTG CCGGTGAGCG TCTCCCTGGC CGTCGGCTCG
GCCGTGCTCT GGCTCGCCGG CGGCCTGGCC GTCGGGCTGG TCGCGGCCCT GCGCCGGGGC
ACCGTGCTCG ACCGCTCGCT CATGGCGGCC ACGCTCGCCT CCGCCTCGGT GCCGGTCTAC
TTCACCGCCA TGATGCTGCT GCTGGTCCTG GTCCAGCAGC TCGAATGGCT GCCCTACCCC
GACTACCGGC CGATCACCGA GGACCCCGCC GCCTGGGCGG GCAACCTGCT GCTGCCCTGG
ATGACGCTCG CCAGCCTGTA CGCCGCCATG TACGCCAGGC TCACCCGGGC CTCGATGATC
GAGACGATGG CGGAGCCGTA CATCAGGACG GCCCGCGCCA AGGGCCTGCA CGAGCGGACC
GTCGTCACCA AGCACGGCCT GCGCTCGGCG CTCACCCCGA TCGTCACGAT CTTCGGCATG
GACCTGGGCG GGCTGCTCGC CGGGGCCGTC ATCACCGAGC ACGTCTTCGG CCTGCCGGGC
GTCGGCCAGC TCACCTACGA CGCGATCTTC AAGGCCGACC AGCCTGTCGT CCTCGGCGTC
ACCCTGCTGG CCGCCTTCTT CATCACCCTG GCGAACCTCG GCGTGGACCT CGTCTACGCG
CTGATCGACC CCCGAGTGAG GTACGCGTGA
 
Protein sequence
MTLYALRRLA AVAGVLLVIC AVTFAIFYVL PSDPAAHACG KTCTPEQVTL VREQMGLDRP 
VHEQFGGYVA GIFAGRTLGT GPAALECSVP CFGYSYQNAL PVWDLLTDRL PVSVSLAVGS
AVLWLAGGLA VGLVAALRRG TVLDRSLMAA TLASASVPVY FTAMMLLLVL VQQLEWLPYP
DYRPITEDPA AWAGNLLLPW MTLASLYAAM YARLTRASMI ETMAEPYIRT ARAKGLHERT
VVTKHGLRSA LTPIVTIFGM DLGGLLAGAV ITEHVFGLPG VGQLTYDAIF KADQPVVLGV
TLLAAFFITL ANLGVDLVYA LIDPRVRYA