| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_3480 |
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| Symbol | |
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| ID | 8666768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptosporangium roseum DSM 43021 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013595 |
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| Strand | + |
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| Start bp | 3850206 |
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| End bp | 3852422 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | |
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| Product | Arabinose efflux permease-like protein |
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| Protein accession | YP_003339159 |
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| Protein GI | 271964963 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0787182 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00623555 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGGCTGG AACGACCGGT ACGTCCTGCG AGCGGCCGGG GCCGGGAGCG ACGGGTCGCC
GTCCTGCTCA CCACGGCCAT GGGCGTGTCG ATGCTCCAGC TCTTCCTGAT CGGCGCGCTC
GGTCCCCGCC TGGTCGGGGA GGCGGGCGTC TCCCGCACCG CGATCGGCCT GACCACGACC
GCCGGATTCG GCGTCGCCGC GCTCCTGTCG CTCACCGCCG GCCGCTGGGT GGATCGGCTG
GGGGCCCGCC GTTGCCTGGT CGCTCTGCTG CTGCTGGCCG CGGTGGCACT GGCACTGATC
GGCTCCGCCC CGGGCACGCC GGCGCTGCTG GCGGCGGTGG CGCTGGGCGG CCTCCCGCAG
GCCCTGGCCA ACCCCGCCAC CAACAAGGTC ATCCTGACCA CGGTCGGACC GGGCAGGCGG
GGAGCGGTCA CCGGCTGGAA GCAGTCCGGA GTGCAGCTCG GCGCCTTCGC GGCGGGACTG
CCGCTGGCGG CGCTCGCCGC GTGGACGGGA TGGCGCGGCG CGGTGTGGAC GGCCGCCGTG
ACCGCCGCCC TCATCGCGTG CTGGGCCGTC CGCGTGCTGC CGGCCGACTC CACCGCCGCG
GCCCCGCCGC CCTCGGACAT GCCGCGCGCC CGCGTCGGCC GGCTGGCGCT GTTCTCCTTC
CTGCTCGGCT GCGGGATCGC AGCGGTGAAC ACCTATCTCG CGCTGTTCGG CGCCGAGCGG
CTGGGGCTGG GGCCGGTCGT GGCGGCCTGG CCGGTCGCGG TCCTGGGTCT TGCCGGGGTC
GCGGGCCGGG TCGGCTGGTC GCGGCGGGCG GACCGCCACG ACCGGGCCGA AGGGGTTCTC
CTTCCTCTCG CGGCGGGAGC CTGCGGAGCG GCCCTGCTGC TCGGCGCGGC CTCGTGGGCC
CCCTTCCTGG TCTGGGTGGG CGCGGCGGCC GTCGGCGCCT TCGCCGTCGC GAGCAACGCG
GTCACCATGC TCGCGGTGAT CAAACGCGCC GACCCCCCGC AGCGCCGGCC GGGACTCCGC
GCTCGTCTCG GCGGGGTTCT TCGCCGGGTT CGCCGCCGGG CCGCCGCTGT TCGGGATCCT
CGCCGAGACC GGGGGATACG GGCCGGGCTG GGGGCTGGTG GCCGCGGAGT TCGCCGTCGC
GGCCGCCGTC GCGGCGCCGC TCCGACTCCG CGCCGGGGCA CCCCGATGAG CTGGGCGGAG
AAGGCGCTGG CCGAGCTTCT GGAGCGGGCC GGGGCGGTCG AGGCGGATAT GGGAGGGCGG
TGGCCGCTGT ACGCGGACCC CGCCTCCGGC CGCTGGACGA CCACCGCCCG CGGATCATGG
ACCGGTGGTT TCTGGGCGGG CCTGCTCCGG CTGCGAGCGA TCATGAGCGG TGATCCGGCC
GACCGGGCCG CCGCGATCAG CCGTACCGCC TCGCTCGACC CGTGGATCCG GGCCGACACC
GGCACCCGGG GCCTCATCTT CTGGTACGGC ACCGCGTTCG GCGCGGTGGA GGGGGACGAC
CCGGCGGCGA CGCTGCGGCA GCGCGCGGCC CGTGCGTGCC TGGACGCCTA CGCCCCCGAG
CTCGGGCTGG TGCCCTGGGG CGGCGCGTTC GGCGGCCCCC GGGAGCTGGC GCGCGTCGAC
GGCCTGCCCG GCCTCACACA GCTCCTGCGC CTGGCGGGCA CCGGCGGAGC CGCGGCCGCC
CGGACCCAGC TCGACCTGCA GTTCGCTCTG ACGGCGGGCG GGCGGCGACT CCGCCCCGCC
TGGCGGGCCC TGCCGGACGG CACCTGGGAA CCCCACCCCA CGCCACCGCC CGGCTGGAGC
CGCACGGCGG CCTGGCTGTC GCTGGCGGTC GCCGACACCG GCACCGGTGA CGGCGACCTG
CGGCGGGCGC TGCTCGCACA TCCCCAGGTG GCGGCCCGGT TCGCCGCGCA CGCGCCCGCC
GTCCCCCTCG CACGCCCCGG CGGCCCGCCG GACACCTCGG CCGCCGCGAT CGAGGCCGTC
GCCGCCCTCA AGCTGGCCGC GCGGGCCGAT CGCGAAGGAA CTGCCCGGCT GCGGGACCGG
GCCGCCGCCG TGCTCCGCGA GCTGGTCGCG GAGCACCTGC GCGGCGGCTG CCTGCTGGAC
GGCTGCTACG ACCTGGAACA CGGCACCGCC ACCCGCCACG AGCTGGTGTG GGGTGACTTC
TTCCTGGCCG TGGGCCTTGC GGTCCTCACC GGGGCGATCG CTCCTTTCGC CTGCTGA
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| Protein sequence | MRLERPVRPA SGRGRERRVA VLLTTAMGVS MLQLFLIGAL GPRLVGEAGV SRTAIGLTTT
AGFGVAALLS LTAGRWVDRL GARRCLVALL LLAAVALALI GSAPGTPALL AAVALGGLPQ
ALANPATNKV ILTTVGPGRR GAVTGWKQSG VQLGAFAAGL PLAALAAWTG WRGAVWTAAV
TAALIACWAV RVLPADSTAA APPPSDMPRA RVGRLALFSF LLGCGIAAVN TYLALFGAER
LGLGPVVAAW PVAVLGLAGV AGRVGWSRRA DRHDRAEGVL LPLAAGACGA ALLLGAASWA
PFLVWVGAAA VGAFAVASNA VTMLAVIKRA DPPQRRPGLR ARLGGVLRRV RRRAAAVRDP
RRDRGIRAGL GAGGRGVRRR GRRRGAAPTP RRGTPMSWAE KALAELLERA GAVEADMGGR
WPLYADPASG RWTTTARGSW TGGFWAGLLR LRAIMSGDPA DRAAAISRTA SLDPWIRADT
GTRGLIFWYG TAFGAVEGDD PAATLRQRAA RACLDAYAPE LGLVPWGGAF GGPRELARVD
GLPGLTQLLR LAGTGGAAAA RTQLDLQFAL TAGGRRLRPA WRALPDGTWE PHPTPPPGWS
RTAAWLSLAV ADTGTGDGDL RRALLAHPQV AARFAAHAPA VPLARPGGPP DTSAAAIEAV
AALKLAARAD REGTARLRDR AAAVLRELVA EHLRGGCLLD GCYDLEHGTA TRHELVWGDF
FLAVGLAVLT GAIAPFAC
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