Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_3455 |
Symbol | |
ID | 8666743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 3799315 |
End bp | 3802932 |
Gene Length | 3618 bp |
Protein Length | 1205 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | WD40 repeat-domain-containing protein-like protein |
Protein accession | YP_003339134 |
Protein GI | 271964938 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0147973 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.02414 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGAGC CTGCCGAGGT CCCGCCACTG TGGCGGGTCG GAGATGTCAT CGACGGCCGG TACGAGGTGG CCCGGGTGCA CGAGCACGGC GGGATGGGGC TGGTGTACCG GGTCCGGCAT CTGCTGTGGG GCACCGATCT CGCGGTGAAA TGCCCCCGCC CGGAGCTGTT CCGGGGCGCG GCCGACCGGG AGCGGTTCGT CACCGAGGCC GAGGTGTGGG TGTCGCTGGG GCTGCACCCG AATGTGTGCG CCTGCCACTA CGTCCGCACG TTGGGCGGCA TTCCCCGGGT GTTCGCCGAA TACGTCGCGG GCGGCAGCCT GCGTGACTGG ATCGACGACC GCAGGCTGTA CGAAGGCACC GAACGCGAGG CGCTCACCCG CATCACGGAC GTCGCGATCC AGACCGCGTG GGGCCTCGAG CACGCGCACA GCCGCGGCCT GGTGCACCAG GACATGAAGC CCGCCAACGT CCTGCTCGAC GAGGAAGGCA CCGCGAAGGT CACCGATTTC GGGCTGGCCA GGGCTCGCGC CGTCGCCATG ACGATGCCCG CACGCGAGGG TACGCCCGGC GTCAGCGTGC TGGTCCCCGC CGGTGGCATG ACCCGTGCGT ACGCCTCGCC GGAACAGACC TCGGGCGAGT CGCTGGGCCG GCGCACCGAC ATCTACAGCT TCGCGGTGTC GGTGCTGGAG ATGTTCACCG GCGGGATCAC CTGGATGGCC GGGCCGATCG CGGGGGAGGC ACTCGCGGCG TACCGCGCCG ACGGGCCGGG GGAGGCCGGG CTTCCGGCCA TGCCCGGCGA ACTCGCCGAC CTGCTGGAGC GATGCCTGCG CCTCGACCCG GCCGATCGGC CGGGCTCGAT GGCCGAGGTC GCCACCGGCC TGGCCGAGGT CCATCAGTGG ATCTCGGGTG GCCCGTATCC GCGTGCCACC CCGGTGGCGG CCGACCTGCG CGCCGACGAG CTCAACAACC GGGGAGTGTC GCTGCTCGAC CTCGACCGCA CGACCGAGGC TCGGGAGGCG TTCGCGGCGG CGCTGGCGGC GGACCCGCAG CACCTGGAGG CCACCTACAA CACGGGCCTG CACCGGTGGC GCCACGGCGA GGTCACCGAC GAAGAACTCA TCACCGGCCT CGAAGCGATC CGCACCGACG CCGGGGATCC GTGGCAGGCA CGCCATCTGC TCGCCCAGGT CCACCTCGAA CGCGGCGACC TCACCGCGGC CCGCGCGCTC CTCGGCGAGC TCGGAGACGA GGCCACCGGC GAACCCGAAG TCCAAGCGGC CCTGCGGACC GTCCAATCCG GACAGCTCAC CGACGCGCGC TGCGCCGAGG CCAGGGCGAT CCCGTGGGCG CTGTTCTGGA ACGACGAGCT GACCGAGCCG GATGGTCCGT ACAAAAGCGG CCCTTACATC CTCACCAGCC TCACCCCCGA CGGTCGGCTG CTGCTGACCG GGGGCCGCGA CGGCATGGTG AAGCTGTGGG ACCTGCGCAG CGGGGAATGC CTCCAGGCGT TAGAGGCGCA CTTCGAGAAC GGGCACCGCA AAGAGGTTTG CTCGGTCGCC CTCACCCCGG ACGGGCGCTT CGCCGCCTCC ACCGGCAAAG ACCAGACCTT GCGGCTGTGG GATCTCGGCA CCGGCCGCTG TTTGCGCGGG TTCGCCCTCA GGCCGCCACC CCAGTTCGAA TACGCGACCC ACCCGGTCGC GCTGAACGCC GATGCGAGCA TCGTGCTGGT ATCGAACGCG GACGGGCCGA TCCAGATCTG GGACGTCCAC AGTGGACAGA TCCGGCGGAC CCTCGCCGGG CACGTCGGCG GCGTGCGCTC GATCGAGCTG ACCGCCGACT GCGACTTCCT GCTCTCCACC GGCAAGTCCA ACGGAGAAGT CCGCTTCTGG GACCTGAGCT CCGGCCGCTA CCGGCCGATC CGCGCGGACG ACGCCTCGCC GGTCAAAGCC AGTTGCCTCG ACCCCGCCGG GCGTCTCGCG GTCATCGGTG CCATGGACGG CACGATCAGC CTGTGGGACC TCCGCACCGG CCGCTGCCTG CGGACCATGA ACGCGCCCGA CTGGGTGGAA ACCGTGTCGC TGAGTGCCGA CGCGCGCTCC GTGCTCTCCG GCTCGCAGGA CAAGGCGGTC CGGATCTGGG ACATCGCCAG CGGGCGATGC CTGCGGACTT TCCGGGGCCA CCGCTCCGCG GTGCGGGCGG TCCGGCTCAG CGCGGACGGC CGCTCCGCGA TCTCCGCCGG CCAGGACAAC GCCGTCCGCC GGTGGGACCT CCCCCTCGAC TGGACCGCCG CACCGCAGCT GAGCAAACCA CGGCGGCACG CGGAACTGAG CCGGCTCGGT GGCGAGGTCG AGGCACTGGT CTCCGAGGCG GTGCGGGAGA TCGCCGCCTC CCGGTACCCG CGCGCGCTCG ACGTGCTCAC CCGGGCACGG GCGATCCCCG GTCACGAGCG ATCGCCTCAG GTACTCACCG CCTGGCGGGC CTTGGGCCGC CACACGGTCC GCACGGGCCT GCGGGCGGCC TGGCCCACGA CGACCTTCTC CGGGCACCGC ATCTACGTGG ACTCGGTCGT GCTTTCCGCC GACGGCACGA TCGCGGTCTC CAGCGGCGGC GACGGGACGA TCCGGATCTG GGACGTCGCC GGCGGAGCCT GCGAGCGCGT CCTCGAAGGC CACTCGAGCA TGGTGAATGA CATCAGCCTG AGCGCCGACA CCCAGCGCGT GCTGTCCGCC GGGCACGACG GCAGGCTCCG GCTGTGGCAC GCCGGCACCG GTGAGTGCCT GCGCGTCCTG TTCGCGAGCA CCCACGGCGC GACCTCGGCG CGGTTCTACG ACGGCGGGCG ACAGGCGCTG GCCGCCGTCA ACAACAGGCT GCAGTTCTGG GATCTGGCCG ACGGCCGTCT CCTGCGGACC GTCGAGGACT GCGGCCTGGC GCACTCGATC TGGGTCAGCC CGGACGAGCG TGTCGCCGTC ACGACCGGTC GAAGCAGGAA GATCCTGCTG TGGGATCTCG GCCGGCGACG GCGGCTGCGC ACCCTGGAGG GGCACGACGA CCAGGTGTCG TCGGTGTCCA TGAGTGCCGA CGGGCGTTCC GTGGTGTCGT GCGGCCGCGG GTACATCCGG TTGTGGGATG TCGTGTCGGG GGAATGCGTG CGGGTCCTCG AGCACCCCGG CCATCCGCTG AAGGCCCGGC TCAGCACGGA CGGGCGCTTC GCGCTCTCGG CCGACAGCGA TTCCTCTCTC CGGGTCTGGG ATGTCCACAG CGGGCAGATG CTGCGTGCCC TGGAAGGACA CCAGAGGCGG ATAGGGGACA TCGCGTTCGC CCCCGATGGC AGCTTCGCCC TGTCCGCGGG CGCCGACGGG ACCGTCCAGC GCTGGGATTT CGACTGGGAA CTGTCGACAC GCGAGCCGGC GGACTGGGCC GACGGCGCGA CCCCCCATCT GGAGCTTTTC CTGGCCCGGC ACCGGACCGG CCGGAAAGCC GGCGACGCCG ACGAGCTGAT GGAGCGGCTC CGGGACGCCG GGTTCGGCTG GCTGCGGCCC GAAGGCGTAC GGGCGCGGCT CGAACGCCGG GGCGCCGGGC GGCTCGGCAC GGTTCTGAGC AGGATGTGGA GACGGTGA
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Protein sequence | MREPAEVPPL WRVGDVIDGR YEVARVHEHG GMGLVYRVRH LLWGTDLAVK CPRPELFRGA ADRERFVTEA EVWVSLGLHP NVCACHYVRT LGGIPRVFAE YVAGGSLRDW IDDRRLYEGT EREALTRITD VAIQTAWGLE HAHSRGLVHQ DMKPANVLLD EEGTAKVTDF GLARARAVAM TMPAREGTPG VSVLVPAGGM TRAYASPEQT SGESLGRRTD IYSFAVSVLE MFTGGITWMA GPIAGEALAA YRADGPGEAG LPAMPGELAD LLERCLRLDP ADRPGSMAEV ATGLAEVHQW ISGGPYPRAT PVAADLRADE LNNRGVSLLD LDRTTEAREA FAAALAADPQ HLEATYNTGL HRWRHGEVTD EELITGLEAI RTDAGDPWQA RHLLAQVHLE RGDLTAARAL LGELGDEATG EPEVQAALRT VQSGQLTDAR CAEARAIPWA LFWNDELTEP DGPYKSGPYI LTSLTPDGRL LLTGGRDGMV KLWDLRSGEC LQALEAHFEN GHRKEVCSVA LTPDGRFAAS TGKDQTLRLW DLGTGRCLRG FALRPPPQFE YATHPVALNA DASIVLVSNA DGPIQIWDVH SGQIRRTLAG HVGGVRSIEL TADCDFLLST GKSNGEVRFW DLSSGRYRPI RADDASPVKA SCLDPAGRLA VIGAMDGTIS LWDLRTGRCL RTMNAPDWVE TVSLSADARS VLSGSQDKAV RIWDIASGRC LRTFRGHRSA VRAVRLSADG RSAISAGQDN AVRRWDLPLD WTAAPQLSKP RRHAELSRLG GEVEALVSEA VREIAASRYP RALDVLTRAR AIPGHERSPQ VLTAWRALGR HTVRTGLRAA WPTTTFSGHR IYVDSVVLSA DGTIAVSSGG DGTIRIWDVA GGACERVLEG HSSMVNDISL SADTQRVLSA GHDGRLRLWH AGTGECLRVL FASTHGATSA RFYDGGRQAL AAVNNRLQFW DLADGRLLRT VEDCGLAHSI WVSPDERVAV TTGRSRKILL WDLGRRRRLR TLEGHDDQVS SVSMSADGRS VVSCGRGYIR LWDVVSGECV RVLEHPGHPL KARLSTDGRF ALSADSDSSL RVWDVHSGQM LRALEGHQRR IGDIAFAPDG SFALSAGADG TVQRWDFDWE LSTREPADWA DGATPHLELF LARHRTGRKA GDADELMERL RDAGFGWLRP EGVRARLERR GAGRLGTVLS RMWRR
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