Gene Sros_3438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3438 
Symbol 
ID8666726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3781586 
End bp3782359 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content71% 
IMG OID 
ProductABC-type uncharacterized transport system permease component-like protein 
Protein accessionYP_003339118 
Protein GI271964922 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.450962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.680022 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCATCG CCGGATACGG CTTCCGCCGT CACTCCGCCT ACCGCGCCGC CGCCCTCGCC 
GGAGCCTTCA CCAACACCGT CTTCGGGATC CTCCGCGCCT ATGTCCTCAT CGCCCTCTGG
GAGGCCCGCC CCGGGCTCGC CGGATACGAC ATCGCCGACG CCGTCACCTT CTGCTTCCTC
AGCCAGGCCT TCATCGGCCC CATGCAGCTC TTCGGCGGCG GGCTGGAGAT CTCCGGACGG
GTCCGCAGCG GAGACATCGC CGTCGACCTC GTCCGGCCGG CGTCGCTGCA GATGTGGAGC
CTCGCCGACG ATCTCGGCCG GGCGTTCTAC CTGCTCCTGC TGCGCAGCCT GCCGCCGACG
GTCGTCGGCG CCGCACTGTT CGGCCTCGTC ACACCGGCCT CCCCGGCGAC CTGGGTGTTC
TTCACCGCGA GCTGCGCGCT GGGAATGATC GTCAGCTTCG GCTGGCGCTA CCTGATGGCG
CTGTCCGCCT GCTGGGTCGT CGACGACCGG GGCACCCAGT CGCTGTCGCT GGTGATGACG
CTCTTCTTCA GCGGCATGGT CCTGCCGCTG AACCTGTTCC CCGGCTGGCT CGGCTCCCTG
GCCGGCGCGC TGCCCTGGTC GGCGATGGTC CAGGTCCCCG CCGACGTCTA CCTCGGCAAG
CGGGATGTCC TGGAGGCGCT GGGATTCCAG GCCGCCTGGG CGGTGGCGCT GCTGACCCTG
GGCGCTCTGC TCACCCGGGC CGCCCGGCAC AGGGTCGTGA TCCAGGGTGG CTGA
 
Protein sequence
MRIAGYGFRR HSAYRAAALA GAFTNTVFGI LRAYVLIALW EARPGLAGYD IADAVTFCFL 
SQAFIGPMQL FGGGLEISGR VRSGDIAVDL VRPASLQMWS LADDLGRAFY LLLLRSLPPT
VVGAALFGLV TPASPATWVF FTASCALGMI VSFGWRYLMA LSACWVVDDR GTQSLSLVMT
LFFSGMVLPL NLFPGWLGSL AGALPWSAMV QVPADVYLGK RDVLEALGFQ AAWAVALLTL
GALLTRAARH RVVIQGG