Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_3438 |
Symbol | |
ID | 8666726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 3781586 |
End bp | 3782359 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | ABC-type uncharacterized transport system permease component-like protein |
Protein accession | YP_003339118 |
Protein GI | 271964922 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.450962 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.680022 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCATCG CCGGATACGG CTTCCGCCGT CACTCCGCCT ACCGCGCCGC CGCCCTCGCC GGAGCCTTCA CCAACACCGT CTTCGGGATC CTCCGCGCCT ATGTCCTCAT CGCCCTCTGG GAGGCCCGCC CCGGGCTCGC CGGATACGAC ATCGCCGACG CCGTCACCTT CTGCTTCCTC AGCCAGGCCT TCATCGGCCC CATGCAGCTC TTCGGCGGCG GGCTGGAGAT CTCCGGACGG GTCCGCAGCG GAGACATCGC CGTCGACCTC GTCCGGCCGG CGTCGCTGCA GATGTGGAGC CTCGCCGACG ATCTCGGCCG GGCGTTCTAC CTGCTCCTGC TGCGCAGCCT GCCGCCGACG GTCGTCGGCG CCGCACTGTT CGGCCTCGTC ACACCGGCCT CCCCGGCGAC CTGGGTGTTC TTCACCGCGA GCTGCGCGCT GGGAATGATC GTCAGCTTCG GCTGGCGCTA CCTGATGGCG CTGTCCGCCT GCTGGGTCGT CGACGACCGG GGCACCCAGT CGCTGTCGCT GGTGATGACG CTCTTCTTCA GCGGCATGGT CCTGCCGCTG AACCTGTTCC CCGGCTGGCT CGGCTCCCTG GCCGGCGCGC TGCCCTGGTC GGCGATGGTC CAGGTCCCCG CCGACGTCTA CCTCGGCAAG CGGGATGTCC TGGAGGCGCT GGGATTCCAG GCCGCCTGGG CGGTGGCGCT GCTGACCCTG GGCGCTCTGC TCACCCGGGC CGCCCGGCAC AGGGTCGTGA TCCAGGGTGG CTGA
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Protein sequence | MRIAGYGFRR HSAYRAAALA GAFTNTVFGI LRAYVLIALW EARPGLAGYD IADAVTFCFL SQAFIGPMQL FGGGLEISGR VRSGDIAVDL VRPASLQMWS LADDLGRAFY LLLLRSLPPT VVGAALFGLV TPASPATWVF FTASCALGMI VSFGWRYLMA LSACWVVDDR GTQSLSLVMT LFFSGMVLPL NLFPGWLGSL AGALPWSAMV QVPADVYLGK RDVLEALGFQ AAWAVALLTL GALLTRAARH RVVIQGG
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