Gene Sros_3406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3406 
Symbol 
ID8666694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3745377 
End bp3746045 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content72% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003339086 
Protein GI271964890 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.209005 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.472724 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAG GGCTGCGGGA GCGCAAGAAG CGAGAGACCC GGCTGCGCAT CTCCGACGTC 
GCGACGGGAC TGTTCATGGC GCGGGGGTTC GACAGCGTGA CCGTCGCCGA AGTCGCCAGG
GCCGCCGACG TCTCGGTCAA CACGGTCTTC AACTACTTCC CTGCCAAGGA GGACCTGCTC
TTCGACCGGC AGGGCGAGGT GGTGGAGCTG CTCGGCAAGG TCATGCGGGA GCGGAGACCC
GGAGAGGGCG CGGCGGAGGC GCTGCGCCGC GACTTCCTGG ACGCCCTCGA CACCGGCCAC
TGGCGGTACG GCATCCACGA GGGGGGCGAC GCCTTCCACC GCATGGTCGG CGCCAGCCCG
GCCCTCGTCG CCCGGCTGCG GGAGATGGAC GACCTCCGAA CGGACTCCCT GGCCCGAACC
CTGGCCGACG AGACCGGCGC CGACCCCGGC GACCTCACCC CCGCGCTCGT CGCCGGCCAG
ATCTGCGCGA CGCTCCACAC GCTGACGGCG TATGCCGTCC GGCGCATGCT CGCCGGCGAG
AGCGTGGCCG CCATCACCCC GGACCTGCGC GAGCAGGCCG GCCATGCCTT CCGCCTCCTG
GAGTCGGGGA TCGGCGGCTA CTGCGTCCGG CGGGAGGAGA CCCCGCGACC GGCGGGGCCA
TGGAGTTGA
 
Protein sequence
MSEGLRERKK RETRLRISDV ATGLFMARGF DSVTVAEVAR AADVSVNTVF NYFPAKEDLL 
FDRQGEVVEL LGKVMRERRP GEGAAEALRR DFLDALDTGH WRYGIHEGGD AFHRMVGASP
ALVARLREMD DLRTDSLART LADETGADPG DLTPALVAGQ ICATLHTLTA YAVRRMLAGE
SVAAITPDLR EQAGHAFRLL ESGIGGYCVR REETPRPAGP WS