Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_3406 |
Symbol | |
ID | 8666694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 3745377 |
End bp | 3746045 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | putative transcriptional regulator, TetR family |
Protein accession | YP_003339086 |
Protein GI | 271964890 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.209005 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.472724 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAG GGCTGCGGGA GCGCAAGAAG CGAGAGACCC GGCTGCGCAT CTCCGACGTC GCGACGGGAC TGTTCATGGC GCGGGGGTTC GACAGCGTGA CCGTCGCCGA AGTCGCCAGG GCCGCCGACG TCTCGGTCAA CACGGTCTTC AACTACTTCC CTGCCAAGGA GGACCTGCTC TTCGACCGGC AGGGCGAGGT GGTGGAGCTG CTCGGCAAGG TCATGCGGGA GCGGAGACCC GGAGAGGGCG CGGCGGAGGC GCTGCGCCGC GACTTCCTGG ACGCCCTCGA CACCGGCCAC TGGCGGTACG GCATCCACGA GGGGGGCGAC GCCTTCCACC GCATGGTCGG CGCCAGCCCG GCCCTCGTCG CCCGGCTGCG GGAGATGGAC GACCTCCGAA CGGACTCCCT GGCCCGAACC CTGGCCGACG AGACCGGCGC CGACCCCGGC GACCTCACCC CCGCGCTCGT CGCCGGCCAG ATCTGCGCGA CGCTCCACAC GCTGACGGCG TATGCCGTCC GGCGCATGCT CGCCGGCGAG AGCGTGGCCG CCATCACCCC GGACCTGCGC GAGCAGGCCG GCCATGCCTT CCGCCTCCTG GAGTCGGGGA TCGGCGGCTA CTGCGTCCGG CGGGAGGAGA CCCCGCGACC GGCGGGGCCA TGGAGTTGA
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Protein sequence | MSEGLRERKK RETRLRISDV ATGLFMARGF DSVTVAEVAR AADVSVNTVF NYFPAKEDLL FDRQGEVVEL LGKVMRERRP GEGAAEALRR DFLDALDTGH WRYGIHEGGD AFHRMVGASP ALVARLREMD DLRTDSLART LADETGADPG DLTPALVAGQ ICATLHTLTA YAVRRMLAGE SVAAITPDLR EQAGHAFRLL ESGIGGYCVR REETPRPAGP WS
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