| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_3395 |
|---|
| Symbol | |
|---|
| ID | 8666683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 3734289 |
|---|
| End bp | 3736055 |
|---|
| Gene Length | 1767 bp |
|---|
| Protein Length | 588 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | Licheninase |
|---|
| Protein accession | YP_003339075 |
|---|
| Protein GI | 271964879 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.585681 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACTCGT CCCGGAGCCC CGGCCGCCAT CCCCACCGCC TGATCCTGCT CGTCGCCGCG
GTGGTCACCC TGGTCACCTC CCTGTCCGTC ATCCCGGCCG CCACGGCCGC CGACACCCTG
CTGTCGCAGG GCAGGCCCGT CACGGCGTCG TCGGCGGAGA ACGTGGCCTT CCCCGCCACC
GCGGCCGTGG ACGGCGATCC CGGAACCCGC TGGTCGAGCG CCTTCAGCGA CCCGCAGTGG
ATCCAGGTCG ACCTCGGAGA GGTCGCCACC GTCACCCAGG TGGTGCTGAA CTGGGAGACC
GCCTACGGCA AGGCCTTCCA GATCCAGACC TCCCGCAACG GCGCCGACTG GACCCCGATC
CACTCCACCA CCACCGGGGC GGGCGGCACG CAGACGCTGA CCGTCAGCGG ATCCGGCCGC
TACGTGCGGA TGTACGGCAC GCAGCGCGCC ACCCAGTACG GCTACTCGCT GTGGGAACTG
CAGATCTACG GCACCCTCGG CGGCGGCCCC GACCCGACCC CCACCCCCAC GCCGACGGTC
CCGGGAGGCG ACAGGCTGCT CTCCTACGGC AGGACGGGGG CGGCCTCCTC CTCCCAGAGC
GACCAGAACT GCTGGGAGTG CACCCCGGCC AGGGCCTTCG ACCGCGACCC GGCCTCGCGC
TGGGCGACCA GCTCCACCAC CGGCTGGGTG GACCCGGGCT GGATCTACGT CGACCTCGGC
GCGACCGCGC AGATCACCAA GGTCGTGCTG CAGTGGGATC CGGCCTACGC CAGGGCCTTC
CAGATCCAGG TCTCACCGGA CGCGTCGGCC TGGACCCCGA TCTACTCCAC CACCGCCGGC
ACCGGCTTCA AGCAGACGCT GACCGTCAGC GGATCCGGCC GCTACGTGCG GATGTACGGC
ACGCAGCGCG CCACCCCCTA CGGCTACTCG CTGTGGGAGT TCCAGGTCTA CGGCACCGGA
GGCGCCCCGA TCACCCCGCC GCCGCTGCCG CCCGACCCGG CCGGCCCGCC CAGGCTCGTC
TGGAGCGACG AGTTCAACGG AGCGGCCGGG ACCAGGCCCG ACGCCGCCAA GTGGACGGCC
GACCCCGGCA CCGGCCCGAA CAACGAGCTG GAGTACTACA CCAACCACGA CAACGCCGCG
ATGGACGGTG CCGGCAGCCT CGTCCTGGAG GCGCGCAAGC AGGTCACCGC CGGATCGACC
TGTCCGAGGG ATCCGCTGAG CGGTAGCGGT ACCTGCCAGT ACACCTCGGC GCGGATGAAC
ACCGGCGGCA AGTTCGAGTT CACCTACGGC CGGGTCGAGG CCCGGGTCAA GGTGCCGAAG
GGCAACGGGC TGTGGCCGGC GTTCTGGATG ATGGGCGCGG ACTTCCGCAC CGGCAGGCCG
TGGCCGTACA ACGGCGAGAT CGACATCCTG GAGGTCCTGG GCAAGGACGT GAAGACCGCC
TACTCGACCG TGCACGCACC CGCCTACAAC GGCGGTGGCG GGGTCGGCGG CTCCTACAGG
CTCCCCGGCG ACGCGGACTT CTCCGACGAC TTCCACGTCT GGGCGGCCAA CTGGGACAGC
AAGGGCATCG TCTACACCCT GGACGGCCGG ACGGTCTTCA CCATCGACAA GGCGGCGGTG
GAGGCGACAC GGGGTCCATG GGTCTTCGAC CACCCCTTCT ACATCATCCT CAACCTCGCG
GTGGGCGGTG ACTGGCCCGG CCCGCCGGAC GCCACCACGC CCTTCCCCCG GAAGATGCTC
GTCGACTACG TGCGCGTCTA CCAGTAG
|
|---|
| Protein sequence | MHSSRSPGRH PHRLILLVAA VVTLVTSLSV IPAATAADTL LSQGRPVTAS SAENVAFPAT
AAVDGDPGTR WSSAFSDPQW IQVDLGEVAT VTQVVLNWET AYGKAFQIQT SRNGADWTPI
HSTTTGAGGT QTLTVSGSGR YVRMYGTQRA TQYGYSLWEL QIYGTLGGGP DPTPTPTPTV
PGGDRLLSYG RTGAASSSQS DQNCWECTPA RAFDRDPASR WATSSTTGWV DPGWIYVDLG
ATAQITKVVL QWDPAYARAF QIQVSPDASA WTPIYSTTAG TGFKQTLTVS GSGRYVRMYG
TQRATPYGYS LWEFQVYGTG GAPITPPPLP PDPAGPPRLV WSDEFNGAAG TRPDAAKWTA
DPGTGPNNEL EYYTNHDNAA MDGAGSLVLE ARKQVTAGST CPRDPLSGSG TCQYTSARMN
TGGKFEFTYG RVEARVKVPK GNGLWPAFWM MGADFRTGRP WPYNGEIDIL EVLGKDVKTA
YSTVHAPAYN GGGGVGGSYR LPGDADFSDD FHVWAANWDS KGIVYTLDGR TVFTIDKAAV
EATRGPWVFD HPFYIILNLA VGGDWPGPPD ATTPFPRKML VDYVRVYQ
|
|---|
| |