Gene Sros_3330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3330 
Symbol 
ID8666618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3628799 
End bp3630760 
Gene Length1962 bp 
Protein Length653 aa 
Translation table11 
GC content73% 
IMG OID 
ProductHistidine kinase 
Protein accessionYP_003339012 
Protein GI271964816 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.323144 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGAGTGC GTACTTATCG ATGGCCGTGG CTGATCCCCG GTGCCTCGTC GACGGCCATC 
CTGGCCGGTG CCGTCCTGAC CGTCGCGGTT CCCGTCCCGG ATGTCACCTA CCTGGTACTC
GACGCCGTGG TCGGCCTGAC CTTCCCCCTC GTCGGGGCGC TGATCGTCAC GCGCAGACCG
CGTAACCTGC TCGGTTGGCT GTTCTGCCTC AGCGGTGCCG GGCTGGCGAT GCAGGCGCTG
GCGGGCGGCT ATGCCGTGTA CGGCGAGGCG CACGGGTGGC CCGGGGCCGG TTTCGCGGCC
TGGGTGATGA ACTGGGTGTT CTTCACCGGG TTCGGGCCGC TCTTCTTGCT GCCGATGTTG
CTGCCCGACG GCCGGCTGCC GTCCCGGCGG TGGCGGTGGG TGATCGGGAC GCTGGTCCTG
ATGACCGTCG TGCTCCAGGC CATGCTGATG TTCCGGGACC GGAGCTGGGT CTGGGGCACC
GAGGAGCCCA ACCCGCTCGG TTTCGTGCCG ACGGACGTCG TCGCGGTCTC CTTCGGCGCC
GTGATCGTCG CGATGTCCGT CGCCGGCGTG GTCGCGGTGG CCATGCGGGT CCGCTCCGCC
CAGGACCGGC GCCGGCTCCT GCCCGTACTG GCCTCGGCCG TCGCCATCGC GCTCGCCTCG
ATCGTCGACG CGGCGCCGCC GGACGGCCTG CCGCTGCTCG GGGCGTGGCT TCAGGCGGCG
ACCCTGCCGC TGCTCCCCGC CGCGGCGGCG GTCGCGATCT TCCGCTACCG GCTGTTCGAC
ATCGAGGTGC TGATCCGGCG TACCGTCGTC TACGTCGCGG TCACGTGCCT GCTGCTCGGC
GCCTACCTGG CGACGGTCAC CACGTTCGAC ACGCTGCTGC GGCAGGACGG CGGGGTGCTG
GAACCTCTCC TGGGCACCGC TGTGGTGGCG GTGGCGTTCG CACCGCTCCG CGACGCGGTA
CAGCGGGCGG TGGCCCGCCT GCTCTTCGGC AACCGGGGCG ATCCCGCGGC GGCGCTGTCC
CTGCTCGGCC AGCGGCTGGA GGTGTCGGCC GACCCGACGC GGCTCCTCGA CGGCGCCGCG
GAGACCGTGG CGCACACGCT CCGGCTTCCC TCGGTCGCCG TGCTCGCCGC CGACGGCACG
CCCGTCTCCG TCGTCGGCGG CGTCCCCGAA CACGGGGTAC GGCTGCCGCT GCTGAGCGGC
GGTCAGCGGG AAGGGGAACT GCGCGCCGCC CCGCGCTCGC CGGGTGAGGA CCTGTCCAGG
TTGGACCTGG CCGTACTCGA CGATCTCGCC CGGCACCTGG CGGTGGCTCT CGCCGCGGTA
CGCCTGGCCC GGGAGGTCCA GTCCTCGCGC GAGCGACTGG TCATCGCGCG CGAGGAGGAG
CGCCGCCGTC TCCGCCGCGA CCTGCACGAC GGCCTCGGCC CCGGCCTGGC CACCATCTGC
GTCCGGCTGG ATCTGATCCG GGCCATGGCA CCGGCCGGCC TGCGCGACCA GCTCCGGGAA
GTACGGCAGC TCACCGACGG GCTCGTCGGT GACATCCGCC GGACCGTGCA TGATCTGCGG
CCCCCGGCGC TGGACGAGCT CGGCCTGGAC GGCGCGCTGG AGGACCTCGT CCTGGACATC
GCCCCGGATC CCGGCGGCGG TCCGGCGGTC GCTGTCAGAG CTCCGCTGCC GTTCCCGGCC
CTCCCGGCGG CGGTGGAGGT GGCCGCGTAC CGGATCAGCC AGGAAGCTCT GGCCAATGCG
CTCCGGCACG CGGACGCGTC GAACGTGGAG ATCACGGTGA GGGCCGAGCC GGAGCGGCTG
TTCCTGGAGA TCCGCGACGA CGGCCGCGGC CTGCCCGACC CCGTCGTAGA GGGAGTGGGA
TCGGGCAGCA TGCGGGAGCG GGCCGCCGAG CTCGGCGGCC TGTTGCGAAG GACGTCCAGC
CAGGGAAAGG GCACGATCGT CGAGGCGGTG CTTCCCCTGT GA
 
Protein sequence
MRVRTYRWPW LIPGASSTAI LAGAVLTVAV PVPDVTYLVL DAVVGLTFPL VGALIVTRRP 
RNLLGWLFCL SGAGLAMQAL AGGYAVYGEA HGWPGAGFAA WVMNWVFFTG FGPLFLLPML
LPDGRLPSRR WRWVIGTLVL MTVVLQAMLM FRDRSWVWGT EEPNPLGFVP TDVVAVSFGA
VIVAMSVAGV VAVAMRVRSA QDRRRLLPVL ASAVAIALAS IVDAAPPDGL PLLGAWLQAA
TLPLLPAAAA VAIFRYRLFD IEVLIRRTVV YVAVTCLLLG AYLATVTTFD TLLRQDGGVL
EPLLGTAVVA VAFAPLRDAV QRAVARLLFG NRGDPAAALS LLGQRLEVSA DPTRLLDGAA
ETVAHTLRLP SVAVLAADGT PVSVVGGVPE HGVRLPLLSG GQREGELRAA PRSPGEDLSR
LDLAVLDDLA RHLAVALAAV RLAREVQSSR ERLVIAREEE RRRLRRDLHD GLGPGLATIC
VRLDLIRAMA PAGLRDQLRE VRQLTDGLVG DIRRTVHDLR PPALDELGLD GALEDLVLDI
APDPGGGPAV AVRAPLPFPA LPAAVEVAAY RISQEALANA LRHADASNVE ITVRAEPERL
FLEIRDDGRG LPDPVVEGVG SGSMRERAAE LGGLLRRTSS QGKGTIVEAV LPL