| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_3272 |
|---|
| Symbol | |
|---|
| ID | 8666560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 3559577 |
|---|
| End bp | 3561982 |
|---|
| Gene Length | 2406 bp |
|---|
| Protein Length | 801 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003338954 |
|---|
| Protein GI | 271964758 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGGCAGT GGTCACGGGT TCTGCGGATC GTGGTGGCCG CGGCGGGGAC GGTCACGGTC
GGGGTGGCGG TCAACCAGAT CCTGAATGGC GGAACGTGGA ACTGGTGGGC GTTGGGCGCC
TCGGCGGGGC TCGCGATAAC GGCGGAAGGG ACGAACCGGT GGCTGGCCCG CCGGGAGGTG
GCGGAGAACG GTTCCGCTCC GTCACCGACG CCGCAGCCCG GTTCTCGGGG GGATCGGCCG
ATCGAGATAG CGGGGAATGT GTCAGGGATC ATCGTGTCTG GCGACAACGC CACGATCACG
CAGACGCATC AGACGGTGCT ACCGCCCCCC ACCCCGATCG CCGCCATCGA TGCCCCCGCC
GGGTTGGGGA ACCTGCCGTT GGCCGCAGGC GAGTTCGTCG GCCGTGAGGA AATCCTCGCC
CAGCTGGATT CGGCGATGGG CGGGGATGAG CCGGTGGTGG TGGCCGTGGT GCAGGGACTG
GGCGGGATCG GCAAGTCCAC CCTGGCCGCA CGATATGCCG CCCTCCACCA TGACAGGTTC
CATCCGGTGT GGTGGATCAC TGCGGACAGC CCCGCCGCGC TGGAGGCCGG ACTCGCCGCC
CTGATCACCG CGCTGGATCC TCGGGATGCT GAAGGCGTGG ATCTGAAAGC CCGGACAGAA
CGCGCGACCG TGTGGCTGGC CACCCACTCG GGATGGCTGC TGGTCCTGGA TGACGTCACC
CGTCCGCAGG ACATCGCTCC GCTGCTGGGC CGGGTGCGGT CCGGACGGGT GGTGGTGACC
AGCCGGCTCC GTCAAGGCTG GCAACGGATC GGCGCCCGGG TCCTGCACCT GGATGTCCTG
TCCGAAGACG AGGCCGTCGA TCTGCTGACC AGGCTCGCCC AACCCGAGGA TCCCGGCCAC
GATGTCCGGC CGGGCGCCCT CGACCTCGTG CAGGAGCTGG GTTTCCTACC ACTGGCGATC
GACCAGGTCG GCGCCTACCT CCACCAGACC GCCCTGACCC CAGCCGCCTA CCTCACCTTG
CTGCGCGCCC AGCCGGAAGT CTTCTTCGAC CAAGCCGCCG AAGGCGCCGA CAGCGACCGG
ACTGTCGCCC GGATCTGGCG GATCACCCTC GACCAGCTCA CTGGCTCTTC CCCGCTCCCG
GGCGATCTCC TGCGGATCTT GGCATGGATG GCACCAGACG CCATTCCCCG CACTCTCCTC
GCCCCCCTCA CCAGGCCACG TCCCGGCGCC CCTCGCCGCC GGCGGTGGCG GCGCACACGG
CACGGTTGGG GGGCACGGCC TCTCACCGAT CAGGCCGGGC TCACGGAGGC CCTCGGCCTG
CTGGCCGCCT ACAGCATGAT CACCCTCAGT AGCAAAACGA TCAGCGTGCA CCGGCTCGTC
CAGGCCGTCG CCCGCGCCCC CGGCACCTCC ACCCCCGGCG GCACCGCCGA TCTCCACCGC
CGGCCCGACC AGATCGCCAC CGCACGCGAC ACCGCCACCG AGCTCCTCTG GCTCATCCTC
CCCTTCGATC TCGAACACCC TGATGCCTGG CCTCTCGCAC GAGCACTCCT CCCTCACATC
ACCGCCCTCA CCGACCACGC ACCCCCCATC ACCGACGCCA TCACGATCAA CCCGCTTCTC
TACCACGTCG GCAATTTCCT GCGCGGGCAG GGCGCACTCC AGCAGGCCAT CACCTACCTG
CAACGCTCTG TGGCGCTCTC AGAGCGTCTC CACGGCCCCG ACCACCCCGA CACCCTGGCC
TCACGCAATG ATCTCGCCCA CACCTACCAG TGGTCGGGGG ATCCGGGCCG CGCCATCCCC
TTGCTGAAGG CGACGCTCGC CGACTGCGAG CGGGTGCTGG GCCCGGACCA CCGAAACACC
TTGCAGACCC GCAACAACCT CGCCAACGCC TACCGGGAGG CGGGTGACTT CGACCGGGCC
ATCCCTCTGC TGGAGGAGAC GCTCGCCCAC CGGGAGCGGG TGCTGGGCAC CGATCACCCC
GACACCCTGA ACTCCCGTAA CAACCTCGCC ATCGGCTATG ACGCTGCGGG GGATCGGGAG
CGCGCCATCT CCCTGCTGGA GGCGACACTC GCCGACAGCG AGCGGGTGCT GGGCGCAGAC
AACCTCCACA CCGCGTCCTT CCGCAACAAC CTGGCCCTCT ACCACCTGGA GGCGGGTGAT
CTCGGCCGGG CCATCCCTCT GCTGGAGGAG ACGCTCGCCC ACCGGGAGCG GGCGCTGGGC
ACCGATCACC CCGACACCCT GAACTCCCGC AACAACCTCG CCGCCGGCTA CCAGGAGGCG
GGTGATCTCG ACCGCGCCAT CCCCCTGTAC GAAGCCACGC TCACCGCCTC CGAGCGGATA
CTGGGCACAG ATCACCGCTT CACCACTGCG GTGCGTGCCA AGCTGACAAC CGTTCGGCCG
GACTGA
|
|---|
| Protein sequence | MRQWSRVLRI VVAAAGTVTV GVAVNQILNG GTWNWWALGA SAGLAITAEG TNRWLARREV
AENGSAPSPT PQPGSRGDRP IEIAGNVSGI IVSGDNATIT QTHQTVLPPP TPIAAIDAPA
GLGNLPLAAG EFVGREEILA QLDSAMGGDE PVVVAVVQGL GGIGKSTLAA RYAALHHDRF
HPVWWITADS PAALEAGLAA LITALDPRDA EGVDLKARTE RATVWLATHS GWLLVLDDVT
RPQDIAPLLG RVRSGRVVVT SRLRQGWQRI GARVLHLDVL SEDEAVDLLT RLAQPEDPGH
DVRPGALDLV QELGFLPLAI DQVGAYLHQT ALTPAAYLTL LRAQPEVFFD QAAEGADSDR
TVARIWRITL DQLTGSSPLP GDLLRILAWM APDAIPRTLL APLTRPRPGA PRRRRWRRTR
HGWGARPLTD QAGLTEALGL LAAYSMITLS SKTISVHRLV QAVARAPGTS TPGGTADLHR
RPDQIATARD TATELLWLIL PFDLEHPDAW PLARALLPHI TALTDHAPPI TDAITINPLL
YHVGNFLRGQ GALQQAITYL QRSVALSERL HGPDHPDTLA SRNDLAHTYQ WSGDPGRAIP
LLKATLADCE RVLGPDHRNT LQTRNNLANA YREAGDFDRA IPLLEETLAH RERVLGTDHP
DTLNSRNNLA IGYDAAGDRE RAISLLEATL ADSERVLGAD NLHTASFRNN LALYHLEAGD
LGRAIPLLEE TLAHRERALG TDHPDTLNSR NNLAAGYQEA GDLDRAIPLY EATLTASERI
LGTDHRFTTA VRAKLTTVRP D
|
|---|
| |