Gene Sros_3142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3142 
Symbol 
ID8666430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3420649 
End bp3421485 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content73% 
IMG OID 
Producttranscriptional regulator, AraC-family 
Protein accessionYP_003338831 
Protein GI271964635 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.844249 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.127089 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGAAA TCCGCCATAA TCCGCGTGCG AGCACAGGTC TCCGCCCCCT GCCCGCCGGC 
GCCGGAATCG ACGCTCACTG GCACGACGAG AACCAGATCG TCTACGCCGG CCGCGGCGTG
CTGTCGGTCA CCACCGACGC GGGCAGCTGG ATCGCCCCCG CCATCCGGGC GATCTGGATC
CCGGCCGGAA CCGTCCATGA GCATCGCGCC TACGGCGACA CCGACCTCCA CCTGGTGGGA
CTGCCGGTGA AGGACAACCC GCTGCGCCTG GACCAGCCCG CGGTCATCAG CGTCGGCCCG
CTGCTGCGCG AGCTGATCAT CACCTACACC GAGCAGCCCG CCGACCTCAC CGCCGAACGC
CGCCGCCTGC GGGCCGTCCT GCTCGACCGG CTCCGCCACT CCGCCCAGCA GCCCGTCCAC
GTGCCCGCCG CCCGAGACCC GCGCCTGGTC GCGGTGTGCG CGATCCTCCG CGACAACCCG
GCCGACAACC GGACCCTGGC GCGACTCGGT GCCGTGGCCG GCGTGAGCGA CCGCACCCTG
ACCCGGCTCT GCAGAGCCGA ACTCGGCATG AGCTTCCCGC AATGGCGCAC CCAGCTGCGC
CTGCACTACG CCCTGCTCCT GCTGGCCGAG GACACCCCGG TCACAGCCGT GGCCCACCGA
TGCGGCTGGG CATCCAGCAG CGCCTTCATC GACGTCTTCC GCCGGGCCTT CGGCCACACC
CCCGGCACCC ACCGCGCGCT GTCGCCCACC GCGACCGCCC CGAGACGCGC CCTGCGCGAA
ACCCTCGATC CGGCCGGCGG CTCACCCGGA CCCGGCGGCC GACGGACCTC GATCTGA
 
Protein sequence
MSEIRHNPRA STGLRPLPAG AGIDAHWHDE NQIVYAGRGV LSVTTDAGSW IAPAIRAIWI 
PAGTVHEHRA YGDTDLHLVG LPVKDNPLRL DQPAVISVGP LLRELIITYT EQPADLTAER
RRLRAVLLDR LRHSAQQPVH VPAARDPRLV AVCAILRDNP ADNRTLARLG AVAGVSDRTL
TRLCRAELGM SFPQWRTQLR LHYALLLLAE DTPVTAVAHR CGWASSSAFI DVFRRAFGHT
PGTHRALSPT ATAPRRALRE TLDPAGGSPG PGGRRTSI