Gene Sros_3130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3130 
Symbol 
ID8666418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3408954 
End bp3409538 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content67% 
IMG OID 
Productisochorismatase hydrolase 
Protein accessionYP_003338820 
Protein GI271964624 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.820956 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.361806 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAAGAG CACTCGTCGT CATCGACGTC CAGGAATCCT TCCGGCAGCT TCCCGACTGG 
GAGTTCGTCT CGCAGCCGGC CATCGTCACG CAGGTCAACC GGCTGGTGGC GGGCGCGCGG
GCTCAAGACG AGCTGGTGGT GTGGGTGCTG GGTTCGCGGC CGGGGTCAGG AACCGTGTTC
GACCCGGCTC GGGGATATGT CCGCCTGATG GAGGGGCTTG ATCCGCGCGC CGGGGAACCA
GTCATCACCA AGACGGCGCA CAACGCCTTC ACCACGACGA ACCTGCACCA GATGCTCACC
GCTAGAGGGG TGAGGGAGCT GACCGTGTGC GGCATCAGGA CCGAGCAGTG CTGCGAGACC
ACCGCCCGGA TCGCCTCCGA CCTGGGATTC GACGTGGTCT TCGCCGTCGA CGCCACGGCC
ACGACCCCGA TCCCGCATCG CGACGCGTCA GCGGATCTGC CGTTCGCGGA ATTGGTGGCG
GACCCGCGGA CGCTGGGAGT CGCCGACGTC ATCGCCCGCA CCGAGTATGC GCTGGCCGGC
CGGTTCGCGG CTGTCCGAAC TGTCGACCAG GTGATCGGAG GTTAG
 
Protein sequence
MKRALVVIDV QESFRQLPDW EFVSQPAIVT QVNRLVAGAR AQDELVVWVL GSRPGSGTVF 
DPARGYVRLM EGLDPRAGEP VITKTAHNAF TTTNLHQMLT ARGVRELTVC GIRTEQCCET
TARIASDLGF DVVFAVDATA TTPIPHRDAS ADLPFAELVA DPRTLGVADV IARTEYALAG
RFAAVRTVDQ VIGG