Gene Sros_3088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3088 
Symbol 
ID8666375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3370024 
End bp3370404 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content69% 
IMG OID 
ProductAnti-anti-sigma regulatory factor (antagonist of anti-sigma factor)-like protein 
Protein accessionYP_003338780 
Protein GI271964584 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.382869 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCCC AGCGACAGCA CCTGCCCGTG CTCGCCGTCT CCGCCACGCT GCGCGACGGG 
GTGAGCATCA TCCACGTCGC CGGTGAACTC GATCTGGCGA CGGCGCCGAC ACTCCGGCGG
CACTTGCGCG CCGCCACCCT TCCTTCCGCT CCGCCGGTGC TGATCGTGGA CGTCCGCGAG
GTCTCCTTCT GCGACTCGGT TGGGTTGAGC GAACTGGTCC TGGCGTTACA TCGCAGTCAG
ACCGGCGGAC AGCGGCCGAT GCTCAGCGGC CAGCACAGGA GCCTTGAGCG GCCGCTGTAC
CGCACCGGCC TGCACAACGC CTTCGAACGA CACGCCAGCT GTGATGCCGC GCTGCGGCAG
GTGGGCGTCG AAGCCGACTG A
 
Protein sequence
MTSQRQHLPV LAVSATLRDG VSIIHVAGEL DLATAPTLRR HLRAATLPSA PPVLIVDVRE 
VSFCDSVGLS ELVLALHRSQ TGGQRPMLSG QHRSLERPLY RTGLHNAFER HASCDAALRQ
VGVEAD