| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_2825 |
|---|
| Symbol | |
|---|
| ID | 8666111 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 3069546 |
|---|
| End bp | 3070475 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | methionyl-tRNA formyltransferase |
|---|
| Protein accession | YP_003338526 |
|---|
| Protein GI | 271964330 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.612911 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.129861 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCGCCTGG TCTTCGCCGG AACCCCGGAC ACCGCCCTGC CCTCGCTGCG GGCCCTGCTC
GACTCGCCGC GCCATGACGT CGTCGCCGTC GTCACCCGGC CGGACGCCCA GTCGGGCCGG
GGCCGCAAGG TCCACCCGAG CCCCGTCGCC GAGCTGGCGG AGGAGGCGGG CATCGAGGTC
CTCAGGCCGC CGAAGGCGGG AGACCCCGAC TTCCTGGAGC GGCTCCGGCG GATCGACCCG
GACTGCTGCC CGGTGGTGGC CTACGGAGCC CTCCTGCCGC AGTCCGCCCT GGACATCCCG
CGTCACGGCT GGGTCAACCT GCACTTCTCG CTGCTGCCCG CCTGGCGCGG CGCCGCCCCG
GTGCAGCACG CCGTGCTGCA CGGCGACCAG ATCACCGGCG CGGCCACCTT CCGGATCGTC
AGGGAGCTGG ACGCCGGCCC GGTCTACGGT GTGGTCACCG AGGAGGTCCG GCCCGCCGAC
AGCAGCGGCG ACCTGCTCGC CCGGCTCGCC GAGTCCGGCG CCGGACTGCT GGTGGCGACC
CTGGACGGGA TCGAGGACGG CAAGCTGGAG GCCGTGCCCC AGCCCGCCGA AGGAGTGAGC
CTCGCACCGA AGATCGGCGT GGACGACGCC AGGGTCGACT GGTCCGCGCC CGCCATGCGG
GTGGACCGCC TCATCCGCGC CTGCACGCCC GCGCCGGGCG CGTGGACGGA GTTCCGCGGC
CAGCGGGTCA AGCTCGGCCC GGTACGGCCG GCGCCCGACG CTCCGGCCCT GGACCCCGGG
CGGATCGCGG CGTCCAAGAA CTCCGTCCTG GTCGGCACGG CCACCCACCC GGTCGAGCTG
GGTGAGGTGC AGCCGCAGGG CAAGCGCCTG ATGGGCGCGG GGGAGTGGGC CCGCGGTGTG
CGGCCCGCAG ACGAAGATCG GCTGGGCTAG
|
|---|
| Protein sequence | MRLVFAGTPD TALPSLRALL DSPRHDVVAV VTRPDAQSGR GRKVHPSPVA ELAEEAGIEV
LRPPKAGDPD FLERLRRIDP DCCPVVAYGA LLPQSALDIP RHGWVNLHFS LLPAWRGAAP
VQHAVLHGDQ ITGAATFRIV RELDAGPVYG VVTEEVRPAD SSGDLLARLA ESGAGLLVAT
LDGIEDGKLE AVPQPAEGVS LAPKIGVDDA RVDWSAPAMR VDRLIRACTP APGAWTEFRG
QRVKLGPVRP APDAPALDPG RIAASKNSVL VGTATHPVEL GEVQPQGKRL MGAGEWARGV
RPADEDRLG
|
|---|
| |