Gene Sros_2752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_2752 
Symbol 
ID8666038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp2987519 
End bp2989693 
Gene Length2175 bp 
Protein Length724 aa 
Translation table11 
GC content74% 
IMG OID 
Productdrug exporter of the RND superfamily-like protein 
Protein accessionYP_003338453 
Protein GI271964257 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0520418 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGCCG TCGCGGCGCC ACCGGCTCCT CCGCCCCTGC GCCGCCTGGG TCACCTGCTG 
GTCCGCCGGA GGCGGCTGGT GATGGTCGTG TCCCTGCTGG CGACGCTCGC CATGGCCGTG
CTGGCGGCCG GAGCGGTGGG CGGGCTGTCG CTGGCCCGGT TCGAGGCGCC GGGCTCGGAG
TCCGACCGGG CGGGAGCCGA GCTGGCCGAG CGGTTCGGCA CCGGCAGCGC GGACCTGATC
CTCCTCGTCA CCGCCAGAGG CGGCGACGTG AACACCCCCG CCGTCGCCGC CGCCGGGCAG
GCGCTGACAC GGGAGCTGGC CGCCTCCGGC GGCGTCGCCG AGGCTGCCTC CTACTGGACG
CGGGGCCGTC CCGCGACCCT GCGCAGCGAG GACGGGCGCC ACGCGCTGGT CGTCGCCCGC
ATCCCCGGCG ACGCCGACGC CGTCCGTTCC CGGATCCTGC CGGAGCTGGT CCCCCGGCTG
ACCAGGGGCA ACGAGGTGAT CTCGGTCAGG TCCGGCGGCG GCGAGGAGGT GTTCCGGCAG
ACCGTCCCGC AGGCCCGGCA GGACTTCGTC CGGGCCGAGA TGGTGATCTT CCCGCTCGTC
TTCGTGCTGC TCTGGCTGTT CCTGCGCCGC GCGGTCGCCG CCCTGCTGCC GATCCTGGTG
GGCGTGTTCG CCATGGTGAC CACGCTGGCC CTGCTGCGCG GGGCGCTGCT GTTCACCGAC
ATCTCCACCT TCGCGCTGAA CCTCACGCTC GCCATGGGGC TCGGTCTGGG CGTCGACTAC
TCGCTGTTCG TGATCTCCCG CTTCCGGGAG GAGGTGGCGC GGGGCCATGA TCTCCACGAG
GCCGTCGCGC GCAGCGTGGA ACGGGCGGGC CGGACGGTGA TCTTCAGTGG CGTGACCGTT
GCCGCCTCCG TCGCGGTGCT GCTGGCGCTG CCGTTCGACT TCCTGCGCTC CTTCGCCTAC
GCCGGGATCG CGGTCGTCGC CGGCGGGGTG ATCGGCGCGG TGATCGTGCT GCCGGCGATC
CTGGCCGCGG TGGGCCGCCG GGTGCTGCCC AAGCGTGACC GTGGTGAGCG CGCCGAGGGG
TTCTGGCACG CGCTGGCCAC CCGGGTCATG CGCAGGCCGG TGGTCTACGG CGGCGCGGCG
GCGCTCGCGC TGCTCGTGCT CGGCTCGCCG TTCCTGGGGC TGCGCTTCGG CGTGGCCGAC
GACCGGATCC TGCCCGCGTC CGCTCCCGCC CGGCAGACCC AGGAGGTGAT CCGTGCCGGA
TTCCCCGCCG AGGAGACCGA CGCGCTGCAG ATCGTCTCGA CGGGCCCGGC GGTGGACGTG
GCGGGCTACG CCACGACGCT GTCCCGCCTG CCCGGCGTGG CGCAGGTCGA CTCCGCGGCC
GGCTCGTTCG CGGCGGGGCG GCGGATCGGG GACGGGGACC CGGCACGGTT CGCCGGAGCG
GAGGGGACCT GGCTGTCGGT GGTGCCCTCG GCCGAGCTGA TGGAGGCCGA TCCGGTCCGC
CTCGTCGAGC AGGTCAGGGC GGTCCCGGCG CCGTTCGGGG TGCTGGTCGG CGGCTACCCG
GCCGAGCTCG CCGACTACCG GACCTCGGTG GTCGACCGGC TGCCGCTGCT GCTCGCCGTC
ATGTTCGCGG TGACCTTCGT GATCCTGTTC CTGATGACCG GCAGCGTGCT GATCCCGCTG
AAGGCGACCG TGCTGAACCT GCTGAGCCTG TCGGTGATGT TCGGCGCGCT CGTCTGGGTC
TACCAGGACG GCAACCTGTC CGGGCTGCTC GGTTTCACCC CCACCGGCAG CCTCGACCCG
AGCATCCCGA TCCTGATGTT CTGCATCGCC TACGGACTCT CGATGGACTA CGAGGTGTTC
GTGCTGTCGC GGATCAGGGA GGAGTACGGG CGCACCGGTG ACACCCCCTC GGCGGTCGCG
GCGGGCCTGC AGCGCAGCGC CCCCCTCATC ACGGCGGCCG GCGCGATCCT GGCGCTCTCC
TTCGCCGTCT ACGCCTCCGC CCAGGTGCTG TTCGTCCAGA TGCTCGGCGT CGGCATGGCC
GTGGCCATCC TCGTGGACGC CACGGTCATC CGGGCGATCC TGGTCCCGGC GTTCATGAGG
CTGGCCGGTC CCGCCAACTG GTGGGCGCCG GCCCCGCTGC GCCGTCTCCA CGACCGCCTG
GGCCTGTCCG ACTGA
 
Protein sequence
MRAVAAPPAP PPLRRLGHLL VRRRRLVMVV SLLATLAMAV LAAGAVGGLS LARFEAPGSE 
SDRAGAELAE RFGTGSADLI LLVTARGGDV NTPAVAAAGQ ALTRELAASG GVAEAASYWT
RGRPATLRSE DGRHALVVAR IPGDADAVRS RILPELVPRL TRGNEVISVR SGGGEEVFRQ
TVPQARQDFV RAEMVIFPLV FVLLWLFLRR AVAALLPILV GVFAMVTTLA LLRGALLFTD
ISTFALNLTL AMGLGLGVDY SLFVISRFRE EVARGHDLHE AVARSVERAG RTVIFSGVTV
AASVAVLLAL PFDFLRSFAY AGIAVVAGGV IGAVIVLPAI LAAVGRRVLP KRDRGERAEG
FWHALATRVM RRPVVYGGAA ALALLVLGSP FLGLRFGVAD DRILPASAPA RQTQEVIRAG
FPAEETDALQ IVSTGPAVDV AGYATTLSRL PGVAQVDSAA GSFAAGRRIG DGDPARFAGA
EGTWLSVVPS AELMEADPVR LVEQVRAVPA PFGVLVGGYP AELADYRTSV VDRLPLLLAV
MFAVTFVILF LMTGSVLIPL KATVLNLLSL SVMFGALVWV YQDGNLSGLL GFTPTGSLDP
SIPILMFCIA YGLSMDYEVF VLSRIREEYG RTGDTPSAVA AGLQRSAPLI TAAGAILALS
FAVYASAQVL FVQMLGVGMA VAILVDATVI RAILVPAFMR LAGPANWWAP APLRRLHDRL
GLSD