Gene Sros_2686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_2686 
Symbol 
ID8665972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp2923896 
End bp2924888 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content70% 
IMG OID 
ProductCell wall-associated hydrolase (invasion- associated protein)-like protein 
Protein accessionYP_003338395 
Protein GI271964199 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0377535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.257604 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGTGG CGGGTATGCC GGTTGGGTTC GGGCGGATGC CGATGGCCGT GGGGGTGGCG 
CTCGCGCTGT TCTTGCTACC GGTCGGCGGT GCCTTCGCCG AGCCGAAGCC GACCGTCGCC
CAGGCCAAGA AGAAGCTGGA GAAGCTCAAC GACCAGGCCG ACAAGGTCGT CGAGAAGTAC
AACCAGGCCG GCGAGAAGCT GAAGAAGGCC CGCAAGAAGT ACCGGACGCT GAACGGCGAC
CTCACGCGCC AGAACGCCAC GGTCGCTGGG CTGCGCCAGG AGCTCGTCAC GATGGCGGTC
AGCAGCTACC AGCTCGGCGG GGTGAGCGGC TGGGAGAGCA TGATCAACCA GCCCGACCCC
GGAACGCTGC TGAGCGGTCT GGCCGCCGTC GACCAGATGT CCGCCTCCCG CGCCCGGTCC
CTGGGCGCCT TCGACGAGGC CAACAAGCTG CTGCGGGTGA GCCGCGACAA GGCCAAGGAG
GCCCTGGCCG AGGCCGACAA GACGCGTGAC GAGCTGGCCG CGGAGAAGGC CAAGGCCGAG
AAGATGGTGA AGGCCCAGAC CAAGCTCCTG CGCGAGCTGG GCACCTTCCA GAGCGGCAAT
CCCAACAGCA CCGGGATCCA GTACAACGGC CCGGCCTCGG GCAACGCCCG GGCCGCCCTG
GCCTTCGCCT TCGCCCAGGT CGGCAAGCCC TACCAGTACG GCGGCACGGG CCCGGGGGGC
TGGGACTGCT CCGGCCTCGT CCAGGCCTCC TGGCGCAGCG GCGGCGTCAG CCTTCCCCGC
ACGACCTGGG AGCAGTGGAG CTGGGGCGCG AGCCGCAAGG TCTCCATCAG CGAGCTCCAG
GCCGGGGACC TCATCTTCAG CGAGGGGCTG GGCCACGTGA GCCTCTACGC GGGCAACGGC
AAGATCGTCC ATGCTCCGCA GACCGGTGAC GTCGTCAAGG TCGTCCCCCT GTCGGCCTAC
GGCCGCCGCC TGGTCGGGGC CGTCCGCCCC TGA
 
Protein sequence
MAVAGMPVGF GRMPMAVGVA LALFLLPVGG AFAEPKPTVA QAKKKLEKLN DQADKVVEKY 
NQAGEKLKKA RKKYRTLNGD LTRQNATVAG LRQELVTMAV SSYQLGGVSG WESMINQPDP
GTLLSGLAAV DQMSASRARS LGAFDEANKL LRVSRDKAKE ALAEADKTRD ELAAEKAKAE
KMVKAQTKLL RELGTFQSGN PNSTGIQYNG PASGNARAAL AFAFAQVGKP YQYGGTGPGG
WDCSGLVQAS WRSGGVSLPR TTWEQWSWGA SRKVSISELQ AGDLIFSEGL GHVSLYAGNG
KIVHAPQTGD VVKVVPLSAY GRRLVGAVRP