Gene Sros_2462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_2462 
Symbol 
ID8665748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp2687105 
End bp2688076 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content69% 
IMG OID 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003338181 
Protein GI271963985 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0431145 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.15102 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC GACGGGTGGT GGTGACCGGC GGAGCCGGCT TCCTGGGGTC GTACCTGTGT 
GAACGCCTCC TCGCCGAGGG AGCGGGGGTG GTCTGCATGG ACAACTTCCT GACCGGTTCC
CCCCGCAACG TCGAGCATCT GATCGGCCGG GCCGCGTTCC GGCTGGTCGA GTGCGACCTC
ACCGGCTTCG TCCACGTGCC CGGTGACGTG GACCTGGTGC TCCACTTCGC CTCGGCGGCC
TCGCCCACCG ACTACCTGCG CCATCCGATA GAGACGCTCA AGGTGGGCAG CCTCGGCACG
CTGCACGCGC TCGGGCTCGC CAGGGAGAAG GACGCCCGGT TCGTCCTGGC CTCCACCAGT
GAGGTGTACG GCGACCCGCT GGAGCACCCG CAGCGGGAGA GCTACCGGGG CAACGTCAAC
CCGGTGGGAC CGCGGAGCGT GTACGACGAG GCCAAGCGTT TCGCCGAGTC GCTGACCACG
GCCTACCGCA ACTCCCACCG GGCCGACACC GCGATCGTGC GGATCTTCAA CACCTACGGG
CCGAGGATGC GGCCCCACGA CGGCCGGGCC ATCCCTACCT TCATCCGTCA GGCCCTGTAC
GGCGAGCCGA TCACCGTGAC CGGTGACGGC GGGCAGACCC GCTCCATCTG CTACGTGGAC
GACACGATCG AGGGGATCTT TGCCCTGGCC GACAGCGGGT TCGAGGGACC GGTCAACATC
GGCAACCCGG CGGAGCTGAC CATGCTCGCC CTCGCGGAGA CGATCCGCGA GCTGACCGGC
TCGGACTCGC CGATCCACTT CATCGACCGT CCCGCCGAGG ACCCGGAGAT CCGCTGCCCC
GACACCTCGC TGGCCGCCTC CCGCCTGGGG TGGACGCCGA AGGTGGACAT CGTCGACGGG
CTGAGCCGTA CCATCTCCTG GTTCGCCGCA GAGCTCCAGG GCCACCGTGA AAGTGCCGAA
TCGAGCAGGT GA
 
Protein sequence
MSTRRVVVTG GAGFLGSYLC ERLLAEGAGV VCMDNFLTGS PRNVEHLIGR AAFRLVECDL 
TGFVHVPGDV DLVLHFASAA SPTDYLRHPI ETLKVGSLGT LHALGLAREK DARFVLASTS
EVYGDPLEHP QRESYRGNVN PVGPRSVYDE AKRFAESLTT AYRNSHRADT AIVRIFNTYG
PRMRPHDGRA IPTFIRQALY GEPITVTGDG GQTRSICYVD DTIEGIFALA DSGFEGPVNI
GNPAELTMLA LAETIRELTG SDSPIHFIDR PAEDPEIRCP DTSLAASRLG WTPKVDIVDG
LSRTISWFAA ELQGHRESAE SSR