Gene Sros_2453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_2453 
Symbol 
ID8665739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp2680591 
End bp2681508 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content69% 
IMG OID 
ProductLysR family transcriptional regulator 
Protein accessionYP_003338174 
Protein GI271963978 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.452417 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.317953 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTGGC AGGAAATCGA GGCCTTCCTG ACGCTGGCCG AGGAGTTGCA CTTCGGTCGC 
ACCGCGGAAC GGCTGCACGT GTCACGGGCG CGGGTAAGCC AAATGATCAA AGTCCTGGAA
CGGCGCGTCG GCGGCCCGCT GTTCGATCGC ACCAGCCGCC GGGTGACGCT GACGCCCGTC
GGGCAGCAGC TCCGCGAGGA CCTGACACCC CATCACCGCG GTATTCACCA GGCGCTCGCC
AAAGCCGCCG ACGCCGCGCG CGGCGTCGGC GGCGTCCTGC GCGTGGGGTT CTCCAGCCCG
CTGGCCAGCG AGATGGTGAT GAAGATCGTG AATGCCTTCC GTGTTCGCCA TCCCGACTGC
GAGGTTCAGA TCCGCGAGGT CCACCTGTCG GACCCCTTCG GGCCTCTGCG CCGCGGTGAG
CTGGACATCC AGCTCACCGA GTTCCCCGTC GACGAGCCCG ACCTGACCGC GGGACCGGTC
CTGATCACCG ACCCCAAAGT CCTCGCCGTA TCCAGTCGCC ACCGTCTGGC TCACCGCGAG
ACGGTCAGCG TGGAGGACCT CGCCGACGAG CTCGTCCTGT TCATCTCCGG AATGCCGGAC
TATTTCGTGG ATCAGTTGAC CCCGCCCCAC ACCCCGAGCG GCAAGCCCAT CCGCCGCTCA
CTCACCACCC GGTACTGGCA GGAACTCCTC ACGCTCGTCG GCGCTGGCCA GGGGGTCACC
GTGGCCGTAG CCCAGGGGGC GCGCTACTAC CCCCGCCCCG ACCTGGCCTA CATCCCCATC
GAAGACGCCC CACCGCTGGA ATACGGACTT CTCTGGCGTA CGGCGGATGC CACCGTCAGG
CGCGGAGCCT TCACGCAGAC GGCACTCGGC TTCGTCTCCG GACCGGCCGC ACCGCGCCGG
CGGGGGCAGT CGCGGTGA
 
Protein sequence
MDWQEIEAFL TLAEELHFGR TAERLHVSRA RVSQMIKVLE RRVGGPLFDR TSRRVTLTPV 
GQQLREDLTP HHRGIHQALA KAADAARGVG GVLRVGFSSP LASEMVMKIV NAFRVRHPDC
EVQIREVHLS DPFGPLRRGE LDIQLTEFPV DEPDLTAGPV LITDPKVLAV SSRHRLAHRE
TVSVEDLADE LVLFISGMPD YFVDQLTPPH TPSGKPIRRS LTTRYWQELL TLVGAGQGVT
VAVAQGARYY PRPDLAYIPI EDAPPLEYGL LWRTADATVR RGAFTQTALG FVSGPAAPRR
RGQSR