Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_2315 |
Symbol | |
ID | 8665597 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 2500852 |
End bp | 2502681 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003338039 |
Protein GI | 271963843 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.973812 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGGACCA CGGACGAGCG ACAGGGCACG CGTGTGCGCA TGCGAGGGGG ACTGCCGCTG AAAGGGGTGT TCCGGCTCCG GCGGTTCGGC GACATCTGGC ACAAGCACGC GCTCAGCGCG GTCATCGCCC TGGCGATCCC CGATCTGGTC CTCCTCGCGC TGGGCCGTCT GGACCTGGCG GTCTACACCT CCGCCGGCGC GATGTGCGCC CTGTACGCGC ACGGCCTGCC GTACGCGGCC CGCGCGCGCA CCCTGCTCCG GGTGGCACTG GGCATGATCG CGAGCGTGGG GGTGGCACTG ACCGCGGCGG GCCTCATCCG ATCCACCATC GCCCTGATCA TCGTGGCCGC GGTGCTGGCC GCCCTGCACA AGGTGGTGTG CGACGCGGCC CGGATCGGCC CGCCGGGAAA TGTGATCTTC ACTTTCATGG CCGCGACGTG CGCCTTCATG CCTCAGCGGC TCGGCGAGGT GCCCTTCCAC CTGGTGCTCG TGACGGCGGG CGCGGCCCTC GCCTGGCTGG TCTGCATGGC CCCCGGGATC GTCCGCCCCG ACGGCCCCCA GCGCATCGCC GTCGCCCGGG CCCTGGAGGC GACCGCCCGC GCCCTGGCGG CAGCCGCGAG GATTCCGGCG GCGACCACGG GGGGTCCGGC GGTGATCGCG AGGATTCCGG CGACGGCGGA GGGGCCGGCG GAGACCACGG GGGGCCCGGT TCCGGCGACC GCGGAGGTTC CGGCGGAGGA CGCCGCCGGG TCCCGGGCCC GCCACGACGC CGCCGCCGCG GTGAACGCCG CCTGGCACAC CCTCCTTCTC GCCCCCGCGG GGCCGGGGCG CGGGGCGCTG GAGCGCCTCC TGGCGCACAC CGAGGAGTCC CTCGCGACGG GATCCGCCGC CGAAGCCGAC CGGCTCGCCG CCTGGGCCGC CGAAGCCGAC CGGCTCGCCG CCTGGGCCGG GGACCTGCGC CGGAACCGGC CGCTGCCCGA GACGGGCCTC ACCGAGGCCG AAGCCGCCGA GCTGACGGGC ATCGCGGTGG AACGGGCCAC GCGCCGCGGC CGCCCGCGCC CGCTGCGGAC CTTCCACCCG GCCTCCCCGC TGTTCCCGAT CGGGATCCGT GTCGCCGTCG GGGCTGCGCT CGCCGGAGTG ATATCGATGG CGGACGGGGT CGGCCACCCC TACTGGGCGA TCGTGACGGC CGCCTCCGTC TTCCAGGCCA ACGCCGTGCT GTCCTGGCAC CGGGCGCTGC AACGCGCATT CGGCAGCCTC GCCGGCCTCC TGCTGTTCAC GGCGCTGCTG CCGGTCAGCC GGGCCGGGCA GCTCGCGCTG GTGCTGCTCG TGCTGCTCCT GCAGTTCGTC ACCGAGGCGC TGATCACCCG CAACTACTGG CTCGGCACCG TCTGCGTGAC CCCGATGGCC CTGCTGCTGA CCGAGTTCCC CGGCTACCAG CCCGCCGGAC CGCTGATCGC CGACCGCTGG CTGGACACCT GCGTGGGCGT CGCGGCGGGG CTGCTCAGCT GCCTGCTGGT GACCAACCGC CGCACCGCGG GCCGGATCGG CGACGCGCTC CGGCGCGTGG CCGTCACGCA GGCCGCCGCG GAACACCTGC TGGAGTCCGG TTCTCCAGGA GCGGGTGACC GGTCCCGGGC CCGCGGCCTG CTTGTCACCG CCCTGGTGGA ACTGCGCGAG GTCACCGAGG TCGCCGCCGG AGAGTGGTGG CAGCGCGCGC TGCCGGAGGA GCGGATCGCC CGCGCCGAGC GGCAGGGGCA CCGGACGCTC GCCCGGCTGG CCGGGCCCGT CCGGGATCCG GCCGGGATAG AGTCGGCTCC GGGCCGATGA
|
Protein sequence | MGTTDERQGT RVRMRGGLPL KGVFRLRRFG DIWHKHALSA VIALAIPDLV LLALGRLDLA VYTSAGAMCA LYAHGLPYAA RARTLLRVAL GMIASVGVAL TAAGLIRSTI ALIIVAAVLA ALHKVVCDAA RIGPPGNVIF TFMAATCAFM PQRLGEVPFH LVLVTAGAAL AWLVCMAPGI VRPDGPQRIA VARALEATAR ALAAAARIPA ATTGGPAVIA RIPATAEGPA ETTGGPVPAT AEVPAEDAAG SRARHDAAAA VNAAWHTLLL APAGPGRGAL ERLLAHTEES LATGSAAEAD RLAAWAAEAD RLAAWAGDLR RNRPLPETGL TEAEAAELTG IAVERATRRG RPRPLRTFHP ASPLFPIGIR VAVGAALAGV ISMADGVGHP YWAIVTAASV FQANAVLSWH RALQRAFGSL AGLLLFTALL PVSRAGQLAL VLLVLLLQFV TEALITRNYW LGTVCVTPMA LLLTEFPGYQ PAGPLIADRW LDTCVGVAAG LLSCLLVTNR RTAGRIGDAL RRVAVTQAAA EHLLESGSPG AGDRSRARGL LVTALVELRE VTEVAAGEWW QRALPEERIA RAERQGHRTL ARLAGPVRDP AGIESAPGR
|
| |