Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_2235 |
Symbol | |
ID | 8665517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 2414080 |
End bp | 2414886 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | Diaminopimelate epimerase |
Protein accession | YP_003337960 |
Protein GI | 271963764 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.40141 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGATTCG TAAAGGGACA CGGTACCGAG AACGACTTCG TCATCCTTCC CGATCCCGAC GGTGAGCTGG AGTTGCCCGC CGCGCTCGTG GCGAGGGTGT GCGACCGGCG TGCCGGGATC GGCGCCGACG GCGTGCTGCG CGTGATGCGG ACCAAGCTCA GCCCCGAGGT CGCCGATCAG GCGGGCGAGG CCGAGTGGTT CATGGACTAC CGCAACTCCG ACGGCGGCGC CGCCGAGATG TGCGGCAACG GGGTGCGGGT CTTCGCCCGC TACCTGGTCG ACGCGGGGCT GGCCGGCGCG GGCGAGTTCG GCGTGGCCAC CCGGGGGGGA GTCAGGCGCG TACGGCTCGC CGAGACCGGC GACGTGACCG TGGACATGGG GACGCCCCGG CTGCTGGGCC GCAGCCGCAC GACCGTGGCC GGCCAGGAGT ACGAAGGCCT CCGCGTCGAC ATGGGCAACC CCCACCTGGC CTGCGCCATC GGCGACCCGG TGGCCCAGCT CGACCTGAGC CACCAGCCCG CGTTCGACCC CGAGGCGTTC CCGAGCGGGG TGAACATCGA GCTGCTCAAC CCGGTGGGGC CGCGCCGGAT CGTGATGCGG GTCTTCGAGC GGGGTTCGGG CGAGACGCGC TCCTGCGGCA CCGGCGCGGT CGCCTCGGCC GTGGCGGCCG CCCACCTGGC GGGGGAGACC ACCGGCACCT GGGCGGTCGA GGTCCTGGGC GGCACCGTCA CCGTCACTCT CGACGAGCGC ACCAGCTATC TGGCGGGCCC CGCGGTCCTG GTCGCCTCGG GAGATCTCTC CCTGTGA
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Protein sequence | MRFVKGHGTE NDFVILPDPD GELELPAALV ARVCDRRAGI GADGVLRVMR TKLSPEVADQ AGEAEWFMDY RNSDGGAAEM CGNGVRVFAR YLVDAGLAGA GEFGVATRGG VRRVRLAETG DVTVDMGTPR LLGRSRTTVA GQEYEGLRVD MGNPHLACAI GDPVAQLDLS HQPAFDPEAF PSGVNIELLN PVGPRRIVMR VFERGSGETR SCGTGAVASA VAAAHLAGET TGTWAVEVLG GTVTVTLDER TSYLAGPAVL VASGDLSL
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