Gene Sros_2235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_2235 
Symbol 
ID8665517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp2414080 
End bp2414886 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content73% 
IMG OID 
ProductDiaminopimelate epimerase 
Protein accessionYP_003337960 
Protein GI271963764 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.40141 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATTCG TAAAGGGACA CGGTACCGAG AACGACTTCG TCATCCTTCC CGATCCCGAC 
GGTGAGCTGG AGTTGCCCGC CGCGCTCGTG GCGAGGGTGT GCGACCGGCG TGCCGGGATC
GGCGCCGACG GCGTGCTGCG CGTGATGCGG ACCAAGCTCA GCCCCGAGGT CGCCGATCAG
GCGGGCGAGG CCGAGTGGTT CATGGACTAC CGCAACTCCG ACGGCGGCGC CGCCGAGATG
TGCGGCAACG GGGTGCGGGT CTTCGCCCGC TACCTGGTCG ACGCGGGGCT GGCCGGCGCG
GGCGAGTTCG GCGTGGCCAC CCGGGGGGGA GTCAGGCGCG TACGGCTCGC CGAGACCGGC
GACGTGACCG TGGACATGGG GACGCCCCGG CTGCTGGGCC GCAGCCGCAC GACCGTGGCC
GGCCAGGAGT ACGAAGGCCT CCGCGTCGAC ATGGGCAACC CCCACCTGGC CTGCGCCATC
GGCGACCCGG TGGCCCAGCT CGACCTGAGC CACCAGCCCG CGTTCGACCC CGAGGCGTTC
CCGAGCGGGG TGAACATCGA GCTGCTCAAC CCGGTGGGGC CGCGCCGGAT CGTGATGCGG
GTCTTCGAGC GGGGTTCGGG CGAGACGCGC TCCTGCGGCA CCGGCGCGGT CGCCTCGGCC
GTGGCGGCCG CCCACCTGGC GGGGGAGACC ACCGGCACCT GGGCGGTCGA GGTCCTGGGC
GGCACCGTCA CCGTCACTCT CGACGAGCGC ACCAGCTATC TGGCGGGCCC CGCGGTCCTG
GTCGCCTCGG GAGATCTCTC CCTGTGA
 
Protein sequence
MRFVKGHGTE NDFVILPDPD GELELPAALV ARVCDRRAGI GADGVLRVMR TKLSPEVADQ 
AGEAEWFMDY RNSDGGAAEM CGNGVRVFAR YLVDAGLAGA GEFGVATRGG VRRVRLAETG
DVTVDMGTPR LLGRSRTTVA GQEYEGLRVD MGNPHLACAI GDPVAQLDLS HQPAFDPEAF
PSGVNIELLN PVGPRRIVMR VFERGSGETR SCGTGAVASA VAAAHLAGET TGTWAVEVLG
GTVTVTLDER TSYLAGPAVL VASGDLSL