| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_1945 |
|---|
| Symbol | |
|---|
| ID | 8665227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 2084203 |
|---|
| End bp | 2085009 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | putative transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003337676 |
|---|
| Protein GI | 271963480 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.951149 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTGCGAAT GGATTTATGC TTATGGAGTG AAACAGCACT TCAGCTCGGT CTGGACCCGC
GAGAGCCGCC CCGCCAAGAG CACGGCGCTC AGCCGTGACC AGATCGTGCG CGCGGCCATG
GAGCTGCTCG ACACCGAAGG CCTCGACGCG CTGAGCATGC GCCGTCTGGG CGCCAGGCTC
GGTTCCGGTG CGACCAGCAT CTACTGGCAC GTGGCCAACA AGGACGAGCT GCTCGAACTG
GTCATGGACG AGGTCTTCGG CAAGGTCGCC CTGCCCGACC CCAGCGTGGT CGGCTGGCGG
GACGCGGTCT CGATGTTCGC CCACGGCCTG CGCGCGGCGC TCTTCGAACA CCCCTGGTCG
GTCGCGCTGA TCGGCACCAG ACCGTCCCTG GGCCCCAACG CGATGGAGAT ATCGAGCCGG
CTGCTGAGGA CGTTCTCGCT GGCGGGGTTC GAGGGCATGG CACTGGACTA CGCCTCGTCC
GCGCTGATGT CCTACGTGCT GGGCGTGACC ACACCCGAGA TCGCCTGGCG CGCCGCCATG
GCCGGCGCCG AGCTGAGCGA CGAAGGGCTG ATGGCCGGAA TGAAGTCCGC GGTGGACAAG
GCCGCCGCCG ACCATCCCGA GCTGGCGGCA CGCTACGCGG AGTACGCCGG CGAGGACCCG
GGCACCAGCC GCGAGCTCAA CTTCGACTTC GGCCTGACCT GCATCCTCGA CGGCCTGCAG
GAACGCCTGA GGCAGGCTTC CATGGAGCCC AGGGCCACGA GGCCCGGACC GGCGACCCCC
CACGAGGCCA GAAGCTCCGA AGCCTGA
|
|---|
| Protein sequence | MCEWIYAYGV KQHFSSVWTR ESRPAKSTAL SRDQIVRAAM ELLDTEGLDA LSMRRLGARL
GSGATSIYWH VANKDELLEL VMDEVFGKVA LPDPSVVGWR DAVSMFAHGL RAALFEHPWS
VALIGTRPSL GPNAMEISSR LLRTFSLAGF EGMALDYASS ALMSYVLGVT TPEIAWRAAM
AGAELSDEGL MAGMKSAVDK AAADHPELAA RYAEYAGEDP GTSRELNFDF GLTCILDGLQ
ERLRQASMEP RATRPGPATP HEARSSEA
|
|---|
| |