| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_1944 |
|---|
| Symbol | |
|---|
| ID | 8665226 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 2083253 |
|---|
| End bp | 2084176 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF6 transmembrane |
|---|
| Protein accession | YP_003337675 |
|---|
| Protein GI | 271963479 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.810804 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGACGCG GTGTCGTGGC GACGCTGGTC TCGGCGGCGG CGTTCGGGCT CATGCCCGTC
TTCGCGTTCT ACGCGTACGG CACGGGGATG TCGGTGACGA CGCTCCTGCT GCTACGGTTC
GCGATCGCGG CTGCGGTGTT CCTGGGCTGG CTGGGGCTGC GTGGCAGGCT CGGTCGGCTG
ACGGGGCGGC AGTGGGCGAC CCTCGCGCTG CTGGGCGGCG GCATGTACGC GGCCCAGTCG
CTGCTGTACT TCACGGCGGT CCAGCGCATC GCGCCGGCCC TCGCGGTGCT GCTGCTGTAC
CTGTATCCGG GGCTGGTCTC GGTCCTGTCG GCGGTGGTGG AGCGGACGCG CATGAGCTGG
AGCGTCGTCG GGCCGATCCT GGTGTCGCTG GCCGGGCTGA CGCTGGTGGT GGGCCGGCTC
GACGCGGGCC TCGACCTTCC CGGCGTGCTC GCGGCGGTCG GGGCCGCCGT GGCCTACGCC
TTCTACATCG TCCTGGGCAG CAGGGTGTCC GCCTCGCTGT CTCCCGCGGT CACCACGGCC
TATCTGACGA TGTTCGCCAC GGGGTCGTTC GCGCTCCTCG GGCTGGCGCT CGGCGGGCTG
GACCTCGGCT TCGCGCCGGC GGGCTGGGGC TGGGCGGCGG CTGTGGCGAT CGTGTCGACC
GTGCTCGCGA TCGCGCTGTT CTTCGTCGGG GCGACGACGC TCGGCCCGGT CCGCGCGTCG
ATCCTCAGCA TGCTGGAGCC CGTCGTGGCG GTGCTCGCCG CGTGGCTGCT GCTGGGCGGG
ACCCTGTCGT GGCCGCAGCT CGCGGGCGGT GCGGTCGTGC TGGCCGGCGC GGTCTGGGGC
ATCCTGGCGA CTCCCGTCCG TGGCGATGCC TCGCCGGGGG ACCCGGCGGG GGAGGAGACC
ACGGCCGTGT CGGCGTCCCC GTAG
|
|---|
| Protein sequence | MRRGVVATLV SAAAFGLMPV FAFYAYGTGM SVTTLLLLRF AIAAAVFLGW LGLRGRLGRL
TGRQWATLAL LGGGMYAAQS LLYFTAVQRI APALAVLLLY LYPGLVSVLS AVVERTRMSW
SVVGPILVSL AGLTLVVGRL DAGLDLPGVL AAVGAAVAYA FYIVLGSRVS ASLSPAVTTA
YLTMFATGSF ALLGLALGGL DLGFAPAGWG WAAAVAIVST VLAIALFFVG ATTLGPVRAS
ILSMLEPVVA VLAAWLLLGG TLSWPQLAGG AVVLAGAVWG ILATPVRGDA SPGDPAGEET
TAVSASP
|
|---|
| |