Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_1917 |
Symbol | |
ID | 8665195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 2040122 |
End bp | 2041963 |
Gene Length | 1842 bp |
Protein Length | 613 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | Chitinase-like protein |
Protein accession | YP_003337648 |
Protein GI | 271963452 |
COG category | |
COG ID | |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAAATTTC GCGTCATCGC TCGATCTCTT GTCGCCCTGG TGGCCCTCGT CACGGCGATG ATGGTCGCGG TCCCCGCCCA GGCCGCCTCG GCCTCCGCCA CCTTCGTCAA GGTCGGCGAC TGGGGTTCCG GCTTCGAGGG CAAGTACACG ATCAAGAACG ACTCCACCAC GGCCCTGACC AGCTGGAAGG TCGAGTTCGA CCTCCCGGCG GGGATCAGCG TTGGGTCCTT CTGGGACGCC ACGCTGGCCC GCAGCGGCCA GCACTTCACC TTCAGCAACG TCGGGTGGAA CGGCAACGTC CCGGCGGGCG GCAGCGTGAG CTTCGGTTTC CTCGGCACCC CCGGCGGGGC GGCCGCCGTA CCGGCGGGCT GCAAGCTCAA CGGCGCCGAC TGCGGCGGTG GGAGCGGTGA GACCGCGCCC GGCAAGCCCG GTGCGGTGTC GGCGACGGGC GGTGCGAACA GCGTCGCGCT GTCGTGGGGG GCGTCGAGCG GAACGGTGAC CGGCTACCGG GTCTATGAGG GCACGACTGT GAAGGCGACG GTCACCGGGA CCGGTGCCAC GGTCTCCGGG CTGGGTGTGT GCGAGGCGCA CACCTACACG GTCGCGGCCT ACAACTCCGC GGGTGAGGGT CCGAAGAGCG ACCCGGCGAG CGCCACCACC ACCGGCTGCG GCACCGGGAC GCCCGGCAAG CCCGGTGCGG TGTCGGCGAC GGGCGGTGCG AACAGCGTCG CGCTGTCGTG GGGGGCGTCG AGCGGAACGG TGACCGGCTA CCGGGTCTAT GAGGGCACGA CTGTGAAGGC GACGGTCACC GGGACCGGTG CCACGGTCTC CGGGCTGGGT GTGTGCGAGG CGCACACCTA CACGGTCGCG GCCTACAACT CCGCGGGTGA GGGTCCGAGG AGCGACCCGG CCAGCGCCAC CACCACCGGC TGCCCCGTCA GCCAGCTGCC CAAGCACTTC CTCACCGGCT ACTGGCACAA CTTCGACAAC CCCGCCGTCG AGCTCAAGCT GTCGGCGGTC CCCAACGAGT ACGACCTGGT CGCGGTCGCC TTCGGCGAGT CCACCGCCAC CCCCGGTGAG GTCGTCTTCA GCGTCGACCC CGGCCTGTCG GCCTCCCTCG GCGGCTACAC CGACGCCCAG TTCAAGGCCG ACGTGCAGAC GCTCCACTCG CGCGGCAAGA AGGTCATCCT CTCGGTCGGC GGCGAGCTCG GCCGGGTGCA GGTGGCCAGC GCCGCCGCGG CGACGAAGTT CGCCGACACC GTCTACGCCC TGATGCAGAG CTACGGCTTC GACGGTGTGG ACATCGACCT GGAGAACGGC CTCAACTCCA CCTACATGGG CCAGGCGCTG CGGGCGCTGC GCGCCAAGGC GGGCGCCGGC CTCATCATCA CGATGGCCCC GCAGACCATC GACATGCAGT CCACCGGCGC GGAGTACTTC AAGCTCGCGC TGAACATCAA GGACATCCTC ACGGTCGTCC ACACCCAGTT CTACAACTCC GGCTCGATGC TGGGCTGCGA CCAGATGGCC GCCTACTCCC AGGGCACGGT CAACTTCATG ACCGCGCTGG CCTGCATCCA GCTGGAGAAC GGCCTCCGCC CCGACCAGGT GGCGCTCGGC CTGCCCGCCG GGCCCGGCGC GGCCGGCGGC GGGATCGTCG CCCCCTCGCT GGTCAACCAG GCGCTGACCT GCCTGGCCAC CCGGACCGGC TGCGGCAGCT TCGTGCCGCC GCGCGCCTAC CCCGAGATCC GGGGCGCGAT GACCTGGTCG ATCAACTGGG ACGCCTCGAA CAACTGGAAC TTCTCCAGAA CCGTCAAGCC GCATCTCGCG ACTCTCCCCT AG
|
Protein sequence | MKFRVIARSL VALVALVTAM MVAVPAQAAS ASATFVKVGD WGSGFEGKYT IKNDSTTALT SWKVEFDLPA GISVGSFWDA TLARSGQHFT FSNVGWNGNV PAGGSVSFGF LGTPGGAAAV PAGCKLNGAD CGGGSGETAP GKPGAVSATG GANSVALSWG ASSGTVTGYR VYEGTTVKAT VTGTGATVSG LGVCEAHTYT VAAYNSAGEG PKSDPASATT TGCGTGTPGK PGAVSATGGA NSVALSWGAS SGTVTGYRVY EGTTVKATVT GTGATVSGLG VCEAHTYTVA AYNSAGEGPR SDPASATTTG CPVSQLPKHF LTGYWHNFDN PAVELKLSAV PNEYDLVAVA FGESTATPGE VVFSVDPGLS ASLGGYTDAQ FKADVQTLHS RGKKVILSVG GELGRVQVAS AAAATKFADT VYALMQSYGF DGVDIDLENG LNSTYMGQAL RALRAKAGAG LIITMAPQTI DMQSTGAEYF KLALNIKDIL TVVHTQFYNS GSMLGCDQMA AYSQGTVNFM TALACIQLEN GLRPDQVALG LPAGPGAAGG GIVAPSLVNQ ALTCLATRTG CGSFVPPRAY PEIRGAMTWS INWDASNNWN FSRTVKPHLA TLP
|
| |