Gene Sros_1917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1917 
Symbol 
ID8665195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp2040122 
End bp2041963 
Gene Length1842 bp 
Protein Length613 aa 
Translation table11 
GC content70% 
IMG OID 
ProductChitinase-like protein 
Protein accessionYP_003337648 
Protein GI271963452 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAATTTC GCGTCATCGC TCGATCTCTT GTCGCCCTGG TGGCCCTCGT CACGGCGATG 
ATGGTCGCGG TCCCCGCCCA GGCCGCCTCG GCCTCCGCCA CCTTCGTCAA GGTCGGCGAC
TGGGGTTCCG GCTTCGAGGG CAAGTACACG ATCAAGAACG ACTCCACCAC GGCCCTGACC
AGCTGGAAGG TCGAGTTCGA CCTCCCGGCG GGGATCAGCG TTGGGTCCTT CTGGGACGCC
ACGCTGGCCC GCAGCGGCCA GCACTTCACC TTCAGCAACG TCGGGTGGAA CGGCAACGTC
CCGGCGGGCG GCAGCGTGAG CTTCGGTTTC CTCGGCACCC CCGGCGGGGC GGCCGCCGTA
CCGGCGGGCT GCAAGCTCAA CGGCGCCGAC TGCGGCGGTG GGAGCGGTGA GACCGCGCCC
GGCAAGCCCG GTGCGGTGTC GGCGACGGGC GGTGCGAACA GCGTCGCGCT GTCGTGGGGG
GCGTCGAGCG GAACGGTGAC CGGCTACCGG GTCTATGAGG GCACGACTGT GAAGGCGACG
GTCACCGGGA CCGGTGCCAC GGTCTCCGGG CTGGGTGTGT GCGAGGCGCA CACCTACACG
GTCGCGGCCT ACAACTCCGC GGGTGAGGGT CCGAAGAGCG ACCCGGCGAG CGCCACCACC
ACCGGCTGCG GCACCGGGAC GCCCGGCAAG CCCGGTGCGG TGTCGGCGAC GGGCGGTGCG
AACAGCGTCG CGCTGTCGTG GGGGGCGTCG AGCGGAACGG TGACCGGCTA CCGGGTCTAT
GAGGGCACGA CTGTGAAGGC GACGGTCACC GGGACCGGTG CCACGGTCTC CGGGCTGGGT
GTGTGCGAGG CGCACACCTA CACGGTCGCG GCCTACAACT CCGCGGGTGA GGGTCCGAGG
AGCGACCCGG CCAGCGCCAC CACCACCGGC TGCCCCGTCA GCCAGCTGCC CAAGCACTTC
CTCACCGGCT ACTGGCACAA CTTCGACAAC CCCGCCGTCG AGCTCAAGCT GTCGGCGGTC
CCCAACGAGT ACGACCTGGT CGCGGTCGCC TTCGGCGAGT CCACCGCCAC CCCCGGTGAG
GTCGTCTTCA GCGTCGACCC CGGCCTGTCG GCCTCCCTCG GCGGCTACAC CGACGCCCAG
TTCAAGGCCG ACGTGCAGAC GCTCCACTCG CGCGGCAAGA AGGTCATCCT CTCGGTCGGC
GGCGAGCTCG GCCGGGTGCA GGTGGCCAGC GCCGCCGCGG CGACGAAGTT CGCCGACACC
GTCTACGCCC TGATGCAGAG CTACGGCTTC GACGGTGTGG ACATCGACCT GGAGAACGGC
CTCAACTCCA CCTACATGGG CCAGGCGCTG CGGGCGCTGC GCGCCAAGGC GGGCGCCGGC
CTCATCATCA CGATGGCCCC GCAGACCATC GACATGCAGT CCACCGGCGC GGAGTACTTC
AAGCTCGCGC TGAACATCAA GGACATCCTC ACGGTCGTCC ACACCCAGTT CTACAACTCC
GGCTCGATGC TGGGCTGCGA CCAGATGGCC GCCTACTCCC AGGGCACGGT CAACTTCATG
ACCGCGCTGG CCTGCATCCA GCTGGAGAAC GGCCTCCGCC CCGACCAGGT GGCGCTCGGC
CTGCCCGCCG GGCCCGGCGC GGCCGGCGGC GGGATCGTCG CCCCCTCGCT GGTCAACCAG
GCGCTGACCT GCCTGGCCAC CCGGACCGGC TGCGGCAGCT TCGTGCCGCC GCGCGCCTAC
CCCGAGATCC GGGGCGCGAT GACCTGGTCG ATCAACTGGG ACGCCTCGAA CAACTGGAAC
TTCTCCAGAA CCGTCAAGCC GCATCTCGCG ACTCTCCCCT AG
 
Protein sequence
MKFRVIARSL VALVALVTAM MVAVPAQAAS ASATFVKVGD WGSGFEGKYT IKNDSTTALT 
SWKVEFDLPA GISVGSFWDA TLARSGQHFT FSNVGWNGNV PAGGSVSFGF LGTPGGAAAV
PAGCKLNGAD CGGGSGETAP GKPGAVSATG GANSVALSWG ASSGTVTGYR VYEGTTVKAT
VTGTGATVSG LGVCEAHTYT VAAYNSAGEG PKSDPASATT TGCGTGTPGK PGAVSATGGA
NSVALSWGAS SGTVTGYRVY EGTTVKATVT GTGATVSGLG VCEAHTYTVA AYNSAGEGPR
SDPASATTTG CPVSQLPKHF LTGYWHNFDN PAVELKLSAV PNEYDLVAVA FGESTATPGE
VVFSVDPGLS ASLGGYTDAQ FKADVQTLHS RGKKVILSVG GELGRVQVAS AAAATKFADT
VYALMQSYGF DGVDIDLENG LNSTYMGQAL RALRAKAGAG LIITMAPQTI DMQSTGAEYF
KLALNIKDIL TVVHTQFYNS GSMLGCDQMA AYSQGTVNFM TALACIQLEN GLRPDQVALG
LPAGPGAAGG GIVAPSLVNQ ALTCLATRTG CGSFVPPRAY PEIRGAMTWS INWDASNNWN
FSRTVKPHLA TLP