Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_1858 |
Symbol | |
ID | 8665136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 1974026 |
End bp | 1975216 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | DNA uptake Rossmann fold nucleotide-binding protein |
Protein accession | YP_003337589 |
Protein GI | 271963393 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.306084 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00651172 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAGCGACC GGCTCGCGCG GGTCACGTTG ATGCGGGTGG CCGAGCCCGG CGACGCCATG ATGGGCAGGC TCGTCGCCGC TCACGGCCCG CAGGCGGCCG TCGCGCGCAT CCGCGAGGGA CGGCCGGAGC CGGAGCTCGC CCGGTGGTTC GCCGACTCCC CCCGCCGGGA GTCGGCCGGC TCGCGGGACG AGCGGCTCAC GGCCAGGCTC GGGCGGATGT TCGCCTCCTG GGCGGCCCGG CTGGAGACGG CCGACCCCGT CCGCGACCTC GACGAGGGGG AGCGCCGTGG GGCGCGGCTG GTGGTCCCCG GCGACTCCGA GTGGCCGACC CAGCTGGACG ACCTCGGCGA GTCCCGTCCC CACGCCTTGT GGCTCCACGG TGAGGCCGAC CTGCGCTTCT CCTGCCTGCG CTCCGTCGCG GTCGTCGGCT CCCGGGCCGC CACGCCGTAC GGCACGCATG TCGCGGCGGA GTTCGGAGCC GGGCTGGGCG AGCGGGGCTG GGTCGTGATC TCGGGCGGCG CCTACGGCAT CGACGGGGCG GTCCACCGCG GCGCCCTCGC GGGGGAGACG CCGACCGTCG CGGTGCTGGC CTGTGGCGCC GACGTCGCCT ATCCCAGCGC GCACCATTCG CTGTTCGCGG CCGTGCGATC CCAGGGAGTG CTGGTGAGCG AGTGTCCGAT GGGCGCCACC CCGACCCGGC CGCGTTTCCT GATCCGCAAC CGGCTCATCG CCGCGCTGTC GCGGGGCACC GTGGTGATCG AGGCGGCGGT GCGCAGCGGG GCGCTCAACA CCGCGGGACA CGCGGTCTCG CTGAACCGCC ATCTGGCCGC CGTGCCGGGG CCGGTGACCT CGGAGACCTC CGCGGGGTGC CATCGGTTGA TCCGGCAGGG GAGGGCCATC TGCGTGACCA CTCCCGAGGA GATGATCGAG CTCGTCGGTG CGATGGGCGG CGACCTGGCC CCCGAACCAC GCGGCCCGGT GCTCCCGCGT GACCGGTTGA GTCCCGAGAT CCGCAGGGTT CTCGAGGCCG TGCCCGCCCG GACCGGGACG GGCCCGGCGA CGATAGCGGT GGCAGCGGGC GTCGACCTGG ACACCGTGCT GTCCTGCCTC GGCGCCCTGG CCGCCGCCGG ATACGTCGAG CGCGCCCCCC GCGGCTGGCG CCTACGCCCT GACGGACCCC CTGCCGGGTA A
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Protein sequence | MSDRLARVTL MRVAEPGDAM MGRLVAAHGP QAAVARIREG RPEPELARWF ADSPRRESAG SRDERLTARL GRMFASWAAR LETADPVRDL DEGERRGARL VVPGDSEWPT QLDDLGESRP HALWLHGEAD LRFSCLRSVA VVGSRAATPY GTHVAAEFGA GLGERGWVVI SGGAYGIDGA VHRGALAGET PTVAVLACGA DVAYPSAHHS LFAAVRSQGV LVSECPMGAT PTRPRFLIRN RLIAALSRGT VVIEAAVRSG ALNTAGHAVS LNRHLAAVPG PVTSETSAGC HRLIRQGRAI CVTTPEEMIE LVGAMGGDLA PEPRGPVLPR DRLSPEIRRV LEAVPARTGT GPATIAVAAG VDLDTVLSCL GALAAAGYVE RAPRGWRLRP DGPPAG
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