Gene Sros_1717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1717 
Symbol 
ID8664994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1834472 
End bp1835860 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content73% 
IMG OID 
ProductMFS transporter 
Protein accessionYP_003337451 
Protein GI271963255 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.33945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.14028 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGCAC CGAAGACGCT TGACGCTCCA TACCAACCTC CCCGGATCTT CGGTTCCGAC 
TACCGCACGG CCACCCTGGG CATCCTGCTC GTCGTCACCC TGATCGCCTT CGAGGGCATG
TCCATCGGCG CGGTGATGCC CGCGGTCTCC GAGGACCTCG ACGCGCTCGA CCTGTACGGC
ATGAGCTTCT CGGCCTTCCT CATCTCGGGC CTGTTCGCCA ACGTCGTCGC GGGCCTCTGG
TCCGACCGGC GGGGGCACGC GCTGCCCTTC CTGCTCGGCG TGGGACTGTT CGTGGTCGGC
ATGGCCATGG CCGGCGCGGC CGGTTCCAAG GAGCTGTTCA TCGTGGCGCG CGCCGTACAG
GGGTTGGGCG GCGGCGCGGT CATCGTGGCG ATCTACGTGA TGATCGCCCG GGTCTACCTT
CCCGAGGTGC GGCCCAGGGT GTTCGCCGCC CTGTCCGCCG CCTGGGTGCT GCCCGCGCTG
GTCGGTCCCG GCCTGGGCGG GATCATCGCG GAGACGGTCG GCTGGCGCTG GGTCTTCTAC
GGGATCGTGC CGCTGGTGAT CCCGGCCCTG CTGATGCTGC TGCCGGCGCT GCGCACCGGG
GAGGGCCCGT CGCCCGAGCC GGCGACCGGA CCCCGCTCCC GGCCGCTGGC GATGACCCTG
GCGGCCGCGG CCACGGCGGG CGGCGCCGGG CTGCTGCTGT ACGGAGTGGA CCGGCTGCAC
GACACCCCGG CGCCCGGCGG GATCACCGCC GCCGCCGGGC TGGTCGCGCT GGCCGTGGGC
CTGCCCAGGC TGCTGCCTCC CCGGGCGCTC AGGTTCGGCC GCGGCCTGCC CACCACGGTC
ATGATGCGCG GGATCCTCGC CTCGGCGTTC TTCGGGGTCA ACGCGTTCAT CCCGCTGCTC
CTCACCGAGG TGCGCGGCCT GTCGGTCGTC GAGGCCGGCG CCGCGCTCAC CATCGGGGCC
CTGGGGTGGA CGACCGGCTC CTACCTGCAG ACCCGCCGCG CCTACGACCG GCCCCGGCTG
GTACGGCTCG GCGCCGCGGC CGTCACCACC GGCATCCTGC TGACGCTCCT CGCGCTCGTG
CCCGGCCTCA CCGCCTGGGT CGCCGTGCCG GCCTGGGTCG TCGCCGGATT CGGCATGGGC
ATCGGCATCA CCAGCGTCAA CGTCACCGCG ATGCGCCAGT CGCCCGACGC CGAGCAGGGG
GCGAACTCCG CCGCCCTCCA GGTCGTCGAC ACCCTGGGCG GCGCGCTCAC GATCGGCTTC
GGCGGTGTCC TGATCAACCT GATCGGCCAC GACGACATCG CCACCGGCTA CACGACGATC
GTGGTCCTGA TGGCCGCCGT GGGACTGCTC GGGGTGATCG TCGCCGGACG CATGCGAGAC
GCCTCCTGA
 
Protein sequence
MTAPKTLDAP YQPPRIFGSD YRTATLGILL VVTLIAFEGM SIGAVMPAVS EDLDALDLYG 
MSFSAFLISG LFANVVAGLW SDRRGHALPF LLGVGLFVVG MAMAGAAGSK ELFIVARAVQ
GLGGGAVIVA IYVMIARVYL PEVRPRVFAA LSAAWVLPAL VGPGLGGIIA ETVGWRWVFY
GIVPLVIPAL LMLLPALRTG EGPSPEPATG PRSRPLAMTL AAAATAGGAG LLLYGVDRLH
DTPAPGGITA AAGLVALAVG LPRLLPPRAL RFGRGLPTTV MMRGILASAF FGVNAFIPLL
LTEVRGLSVV EAGAALTIGA LGWTTGSYLQ TRRAYDRPRL VRLGAAAVTT GILLTLLALV
PGLTAWVAVP AWVVAGFGMG IGITSVNVTA MRQSPDAEQG ANSAALQVVD TLGGALTIGF
GGVLINLIGH DDIATGYTTI VVLMAAVGLL GVIVAGRMRD AS