Gene Sros_1626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1626 
Symbol 
ID8664903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1733209 
End bp1734465 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content69% 
IMG OID 
Productputative sugar ABC transporter, periplasmic sugar-binding protein 
Protein accessionYP_003337360 
Protein GI271963164 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.188232 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGTC TGCTCCCCGT CGTGCTCGCC GTGCTGGTCA CGGCGGGATG CTCGACGGCG 
GTGGCGCAGA AGACGGAGCG GTTCGGCGGG AGTGGTCCGT TCACCCTGGT GACCGGACGC
GACACGACCG GCTATCTGCA ACCGCTGCTC GACCGGTGGA ACGAGACCCA CCCCGGGGAA
CGCGTGACCC TGCTCGAACT CCCCGAGGCG GCCGACGAGC AGCGCGCGCA GATGGTCGCC
AACCTGCAGG CCAAAAGCGA CCGCTACGAC GTGCTCGGCC TCGACGTGGT CTGGACGGCG
GAGTTCGCCG ACGCCGGCTG GATCCTGCCG CTCGAGCGCG GCGCGTTCCC GCTGGACCGG
TTCCTTCCGC CGGTCGTGGA CACGGCGGTC TACCAGGACA AGCTCTGGGC GGTGCCGTAC
ACCAGCAACG CCGGACTGCT CTACTACCGC AAGGACCTGC TCGCCAAGCA GGGCTTCAAG
CCGCCCAGGA CCTGGGCGGA GCTGCGTGAG CAGGCCCGGA CGCTGCACGA CAAGTATGAC
ATCGGCGGCT ACGCCGGCCA GTTCCTCGCC TACGAGGGGC TGACCGTCAA CTTCGCCGAG
GCCGTGCAGT CGGCGGGCGG CCAGATCCTC AGCCGGGACG GCACGCAGGT GACCATGGAC
GTGGCCAGGG CGAAGACCGG TCTGGACTTC CTGACCGGCG GCTTCCGGGA GGGATGGATC
CCCCAGGAGT CGCTCTCCTT CAAGGAGGAG GAGTCACGGC TGGCCTTCCA GGAGGGCCGG
CTGGCCTTCT CCCGCAACTG GCCACACGCC TACGGCCCGG CCACCACCTC GGCGGTCGGT
GACAAGTTCG GCGTGACCCG CCTCCCCGGG CTGAACGGCC CGGGTTCCAG CTCGCTGGGC
GGGGTCAACC TCGCGCTCAG CGCATACTCC AAGCGGCAGA AGTCGGCGGT GGAGTTCATC
CGCTACTTCA CCGGCCTGGA GAACCAGCGG CGGGTGCTCG CCGACGGCTC GTTCCCGCCC
GTGTGGGCCG AGCTGTACGA CGACCCCGGC CTGATCAAGC GTTTCCCCTA CCTGCCGGTC
CTCAAGCAGA GCATCCTCTC CGCGCGGCCG CGACCGGCGA GTGCCAACTA CAACCAGGTG
AGCCTGGTGA TCGCCAGTGC GGTCTCCAAC GCGCTCACCC CACCCTTCAC GGAGGCGGGC
GACGACGTCG TCGCCTCCAT GAAGGGCCAG CTCAACGAGA TCATCCGGGC TCAGTGA
 
Protein sequence
MRRLLPVVLA VLVTAGCSTA VAQKTERFGG SGPFTLVTGR DTTGYLQPLL DRWNETHPGE 
RVTLLELPEA ADEQRAQMVA NLQAKSDRYD VLGLDVVWTA EFADAGWILP LERGAFPLDR
FLPPVVDTAV YQDKLWAVPY TSNAGLLYYR KDLLAKQGFK PPRTWAELRE QARTLHDKYD
IGGYAGQFLA YEGLTVNFAE AVQSAGGQIL SRDGTQVTMD VARAKTGLDF LTGGFREGWI
PQESLSFKEE ESRLAFQEGR LAFSRNWPHA YGPATTSAVG DKFGVTRLPG LNGPGSSSLG
GVNLALSAYS KRQKSAVEFI RYFTGLENQR RVLADGSFPP VWAELYDDPG LIKRFPYLPV
LKQSILSARP RPASANYNQV SLVIASAVSN ALTPPFTEAG DDVVASMKGQ LNEIIRAQ