| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_1625 |
|---|
| Symbol | |
|---|
| ID | 8664902 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 1731669 |
|---|
| End bp | 1732997 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | alpha-glucoside ABC transporter periplasmic- binding protein |
|---|
| Protein accession | YP_003337359 |
|---|
| Protein GI | 271963163 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.234885 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.190993 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTAAAA CCATCGCGAC AGTGACGACG GCGGGCCTGG CACTCGCCCT CGCCGCGTGC
GGCCAGTCCT CCGAGACCGG CGCCTCCCCC GCCGCGAGCA GCAGCTCCTC CGCCGCCGCC
CCGGCCGCCA AGACGCTTGA GGGCGTGACC ATCGAGGTCG CCGCCAAGTG GACCGGCGCC
GAGCAGACCA ACTTCCAGGA AGTGCTCAAG GCGTTCGAGG CCAAGACCGG CGCCAAGGTC
ACCTACGCCT CCACCGGCGA GGACACCGGC GCCTACCTCG GCCCGCGCAT CCAGGGCGGC
AACCCGCCGG ACATCGCGAT CCTCCCCCAG CCGGGCCTGG TCCAGCAGTA CGCCGACCAG
AAGGCGCTCA AGCCCCTCGC CCCCGAGGTG CTCAAGCAGA TCGACGACAA CTACACCCCG
TACTGGAAGG AGCTCGGCTC CGCCGACGGC CAGGCCTACG GCGTGCTGGT GAAGGCGGCC
CACAAGTCGC TCATCTGGTA CCGCGACCAG GCCTTCCAGG ACGCCGGGGC GCAGCCGCCG
ACCACCTGGG ACGAGCTCGT CAAGACCGCC CAGGCCGTCG CCGACTCCGG CACCCCGCCC
TTCTCCCTCT GCGGCGCGTC CGGCTGGACC CTGACCGACC TGTTCGAGAA CGTCTACCTG
TCCAGCGCGG GCCCGGAGAA CTACACCAAG CTCTCCAAGC ACGAGATCCC GTGGACCGAC
GCCAGCGTGA CCACCGCGCT GGAGAAGATC GGGCAGCTCG TCGGCAAGAA GGAGTTCCTG
CTCGGCGGCT CCTCCGGCGC CCTGCAGACC GACTTCCCGA CCTGCGTGAC CCAGGTCTAC
GGCCAGGACA AGTCGGCGAT GGTCATCGAG GCGGACTTCG TGGCCACCAC CGCCGAGGAG
TCCGGCGCGA AGCTCGGCGA GGAGGCCAAG TACTTCGCGT TCCCGAAGGC CGGCGACACC
GAGCCGGTCG TGCTGGGCGG CGACATCGCG GTGGTGCTGA AGGAATCCAA GGGCGCGATG
GCGCTGCTGG AGTTCCTCGC CTCCAAGGAG GGCGGCGAGA TCTGGGCGAA GCTCCCGGGC
TACCTGTCCC CCAACCGCAA CGTCTCTCCG GACAACTACC CGGCCGAGCT GACCAAGAAG
CTCGCCCAGA CGATCATCTC CGCCGGTGAC GCCGTCCGCT ACGACATGTC CGACCTGGCG
CCCAGCGCCT TCGGCGGCAC CGACGGCAAG GGTCAGTGGA AGCTCCTGCA GGACTTCGTC
CGCGACCCGT CCAAGATCAA GGACATCCAG TCCAAGCTTG AGGACGAGGC CAAGAAGGCC
TGGAAGTAA
|
|---|
| Protein sequence | MRKTIATVTT AGLALALAAC GQSSETGASP AASSSSSAAA PAAKTLEGVT IEVAAKWTGA
EQTNFQEVLK AFEAKTGAKV TYASTGEDTG AYLGPRIQGG NPPDIAILPQ PGLVQQYADQ
KALKPLAPEV LKQIDDNYTP YWKELGSADG QAYGVLVKAA HKSLIWYRDQ AFQDAGAQPP
TTWDELVKTA QAVADSGTPP FSLCGASGWT LTDLFENVYL SSAGPENYTK LSKHEIPWTD
ASVTTALEKI GQLVGKKEFL LGGSSGALQT DFPTCVTQVY GQDKSAMVIE ADFVATTAEE
SGAKLGEEAK YFAFPKAGDT EPVVLGGDIA VVLKESKGAM ALLEFLASKE GGEIWAKLPG
YLSPNRNVSP DNYPAELTKK LAQTIISAGD AVRYDMSDLA PSAFGGTDGK GQWKLLQDFV
RDPSKIKDIQ SKLEDEAKKA WK
|
|---|
| |