Gene Sros_1622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1622 
Symbol 
ID8664899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1728517 
End bp1729194 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content70% 
IMG OID 
Producturacil-DNA glycosylase 
Protein accessionYP_003337356 
Protein GI271963160 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0212304 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.240116 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCAC GTCCTTTGAA TGAAGTCGTG GAAGCCGGGT GGGCCACGGC CCTGGAACCC 
GTCGCCGAGA AGATCGCCGC CATGGGCGAC TTCCTCCGGA AGGAGGTCGC CGAAGGCCGG
CAGTACCTCC CTTCGGGACC AAATGTGCTC CGCGCCTTCC AGCAGCCCTT TGACCAGGTC
AAGGTGCTGA TCGTCGGCCA GGATCCCTAT CCCACGCCGG GCCACCCGAT CGGCCTGAGC
TTCTCGGTGG CCGCCGACGT CCGGCCCATC CCGGGGAGCC TGCGCAACAT CTACAAGGAG
CTCACCGAGG ACCTCGGGCT GCCCATGCCG AGCAACGGCG ACCTGACCCC CTGGGCCGAG
CACGGCGTGC TGCTGCTCAA CAGGGTGCTC ACCGTCGTGC CGGGCAAGCC CGCCTCGCAC
CGGGGCAAGG GCTGGGAGGA GGTCACCGAG CAGGCCATCA AGGCGCTCGC CGCGCGCGAC
AAGCCGCTGG TCGCGATCCT GTGGGGCCGC GACGCCCGCA ACCTGCGCCC GATGCTCGGC
GACGTCCCGG CCATCGAGTC GGCCCACCCG AGCCCCCTGT CGGCCCGGAG CGGGTTCTTC
GGCTCGCGCC CGTTCAGCCG GGCCAACGAG CTCCTCGAGC AGCAGGGCAC GACGCCGGTG
GAGTGGAAGC TCCCCTAG
 
Protein sequence
MSARPLNEVV EAGWATALEP VAEKIAAMGD FLRKEVAEGR QYLPSGPNVL RAFQQPFDQV 
KVLIVGQDPY PTPGHPIGLS FSVAADVRPI PGSLRNIYKE LTEDLGLPMP SNGDLTPWAE
HGVLLLNRVL TVVPGKPASH RGKGWEEVTE QAIKALAARD KPLVAILWGR DARNLRPMLG
DVPAIESAHP SPLSARSGFF GSRPFSRANE LLEQQGTTPV EWKLP