| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_1572 |
|---|
| Symbol | |
|---|
| ID | 8664849 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 1667879 |
|---|
| End bp | 1668802 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003337308 |
|---|
| Protein GI | 271963112 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCCTCG CCCTGCGGCG GGTGGCGGAG ATGCTCCCGG TCCTGCTGGC GCTGTCGGTG
CTGACCTTCC TCCTGACGTC GCTGGCCCCC GGGGACCCGG CCGAGGAGAT CCTCCGCCGG
GGCGGCGTCC AGCCCACCGC GGAGAGCGTG GCCGTCCTGC GGGGCGAGCT CGGCCTGGAC
CGGCCGCTCT TCTCCCGGTA CCTCCAGTGG CTGCTCGGCG TGGTGCGGGG CGACTTCGGG
CGCTCCTACG CCGACCGCGC GCCGGTGGCC GCCGAGATCC TGTCGCGGGT CCCGGCGACG
CTGCGGCTGG CCGGGACGGC CTCGCTCGTC GCGGTCGGGC TCGCGGTGCT CGTGTCGGTC
CGCGTCGCGC TCCGGCCGCG TGCCCTCGAC AGCCGGATCG CGCGGGTCGT GACGGTGGCG
GTCGCCGCGG TCCCGCCGTA CATCGTCGGC ATCCTGCTGA TCAGTGTGGT CGCCGTCGGC
ATGCGGGCCC TGCCGACCGG CGGGGACGGC TCCCCGGGGG CGGTGATCCT GCCCGCGGTC
ACCCTCGGCC TGGCCGGAGC GGCCACGCTG CTGCGGCTGC TGGGGGCCGA CCTGGCGGCC
GTGGCGCGGC TGCCCTTCGT CAAACTCGCG GTGGCCAAGG GCCTGAGCGC GCGCCGCACC
GTCGTGGTGC ACGCGCTGCG CGCGGCCGCG CCCGGTGCGA TCACCGCGGC CGGCGTCGTG
CTGGCCGAGC TGCTGGCCGG CGCGGTGATC GTCGAGACCC TGTTCGCCTG GCCCGGTGTG
GGGCAGCTCG CCGTGACGGC GATCCGGCAG CGGGACATCC CGATCGTGCA GGCATACGTC
CTGCTCACCG CGCTCGCGAC CGTGGTGGTC CTGACCCTGG CCGACCTGTG CGTGTCGGTG
GCCGACCCCC GGGTGCGACG GTGA
|
|---|
| Protein sequence | MTLALRRVAE MLPVLLALSV LTFLLTSLAP GDPAEEILRR GGVQPTAESV AVLRGELGLD
RPLFSRYLQW LLGVVRGDFG RSYADRAPVA AEILSRVPAT LRLAGTASLV AVGLAVLVSV
RVALRPRALD SRIARVVTVA VAAVPPYIVG ILLISVVAVG MRALPTGGDG SPGAVILPAV
TLGLAGAATL LRLLGADLAA VARLPFVKLA VAKGLSARRT VVVHALRAAA PGAITAAGVV
LAELLAGAVI VETLFAWPGV GQLAVTAIRQ RDIPIVQAYV LLTALATVVV LTLADLCVSV
ADPRVRR
|
|---|
| |