Gene Sros_1561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1561 
Symbol 
ID8664837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1658488 
End bp1659501 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content74% 
IMG OID 
ProductCell wall-associated hydrolase (invasion- associated protein)-like protein 
Protein accessionYP_003337297 
Protein GI271963101 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.308616 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACGA CAGTCTTCGT CGCCACCGTC CTCGCGGCGG CCCTCGCAGG GGGCCCTCAG 
GCTTCTCCCG CCCGTCCCTG TCCGCAGGCC GTCGATGACT GGAGGCGCCC GCTGCCCGAG
GCCGAGCTGC CGGACGGTGC CCGGAGACGG TTCGAAGCAG GAGTCCGTCT CGTGCTCGCC
GCTGCCTGCG GGCTCTCCCG CACGGGCCCG GAGTTCCCAC CCCGGGCCGC CCGGGGCGAC
GCTGAGGACA CTCTCTCCGG CAGGGGCGTC CCCCGGCCTC CGGACGCCAC CGTCTCCGCC
CCCGGATCCC CCGACGCCGT CGGCTCTTCT GGCTCCGGTG GCCCCGAGTC CCCCGGCGCC
GCGGGCTTCC CCGGTTCCGG ATCCCCTGAC GGCACCGGTC CTTCTGGCCC CGGTTCCTCC
GATGCCGCCG TTTCCCTCGC TTCCGGATCC TCCGGCGCCC CTCGCTCCGC CGGTTCCGGA
CCTTCTGGCC TCGCCGGTTC CTCCGGCCCC GGATCACCCT CGCGGGTCCG CCAGCCGGCC
GTCGTCTCCT CCGCCAGGCC GGAGGCGTCC CGTTCCCTGT CGGCCCCTGC CCGGCAGTCA
CGCCTCCCCT CACCGGGACA GACGGCGGTG GCCGCGGCGC TCCGCCAGGT CGGCAGGCCG
TACGTCTGGG GCGGCGGTTC CAGCGCGGGC CCGACCGGTG GTGGCTTCGA CTGCTCCGGC
CTCGCGCTGC ACGCCTGGTC CAGGGCGGGG GCCGCGCTCA CCCACTACAC CGGCAGCCAG
TTCCGGCAGG GGCGCCGTGT GCCGTTCTCC CAGCTCCGTC CCGGAGACCT GGTCTTCTTC
GGAGGCGGCA CCGGAGACCC CACCCACGTG GGCGTCTACG TGAAGAACGG TGTCATGGTG
CACGCTCCCA AGACCGGTGA CGTCGTCAAA ACGACGGACT TCGCCGCCTC CGCCTACTAC
CGCTCGCGCT ACCGAGGCGC GGTCCGTCCG GCCCCCCGGA CACCTGCCAG TTGA
 
Protein sequence
MITTVFVATV LAAALAGGPQ ASPARPCPQA VDDWRRPLPE AELPDGARRR FEAGVRLVLA 
AACGLSRTGP EFPPRAARGD AEDTLSGRGV PRPPDATVSA PGSPDAVGSS GSGGPESPGA
AGFPGSGSPD GTGPSGPGSS DAAVSLASGS SGAPRSAGSG PSGLAGSSGP GSPSRVRQPA
VVSSARPEAS RSLSAPARQS RLPSPGQTAV AAALRQVGRP YVWGGGSSAG PTGGGFDCSG
LALHAWSRAG AALTHYTGSQ FRQGRRVPFS QLRPGDLVFF GGGTGDPTHV GVYVKNGVMV
HAPKTGDVVK TTDFAASAYY RSRYRGAVRP APRTPAS