Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_1561 |
Symbol | |
ID | 8664837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 1658488 |
End bp | 1659501 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | Cell wall-associated hydrolase (invasion- associated protein)-like protein |
Protein accession | YP_003337297 |
Protein GI | 271963101 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.308616 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCACGA CAGTCTTCGT CGCCACCGTC CTCGCGGCGG CCCTCGCAGG GGGCCCTCAG GCTTCTCCCG CCCGTCCCTG TCCGCAGGCC GTCGATGACT GGAGGCGCCC GCTGCCCGAG GCCGAGCTGC CGGACGGTGC CCGGAGACGG TTCGAAGCAG GAGTCCGTCT CGTGCTCGCC GCTGCCTGCG GGCTCTCCCG CACGGGCCCG GAGTTCCCAC CCCGGGCCGC CCGGGGCGAC GCTGAGGACA CTCTCTCCGG CAGGGGCGTC CCCCGGCCTC CGGACGCCAC CGTCTCCGCC CCCGGATCCC CCGACGCCGT CGGCTCTTCT GGCTCCGGTG GCCCCGAGTC CCCCGGCGCC GCGGGCTTCC CCGGTTCCGG ATCCCCTGAC GGCACCGGTC CTTCTGGCCC CGGTTCCTCC GATGCCGCCG TTTCCCTCGC TTCCGGATCC TCCGGCGCCC CTCGCTCCGC CGGTTCCGGA CCTTCTGGCC TCGCCGGTTC CTCCGGCCCC GGATCACCCT CGCGGGTCCG CCAGCCGGCC GTCGTCTCCT CCGCCAGGCC GGAGGCGTCC CGTTCCCTGT CGGCCCCTGC CCGGCAGTCA CGCCTCCCCT CACCGGGACA GACGGCGGTG GCCGCGGCGC TCCGCCAGGT CGGCAGGCCG TACGTCTGGG GCGGCGGTTC CAGCGCGGGC CCGACCGGTG GTGGCTTCGA CTGCTCCGGC CTCGCGCTGC ACGCCTGGTC CAGGGCGGGG GCCGCGCTCA CCCACTACAC CGGCAGCCAG TTCCGGCAGG GGCGCCGTGT GCCGTTCTCC CAGCTCCGTC CCGGAGACCT GGTCTTCTTC GGAGGCGGCA CCGGAGACCC CACCCACGTG GGCGTCTACG TGAAGAACGG TGTCATGGTG CACGCTCCCA AGACCGGTGA CGTCGTCAAA ACGACGGACT TCGCCGCCTC CGCCTACTAC CGCTCGCGCT ACCGAGGCGC GGTCCGTCCG GCCCCCCGGA CACCTGCCAG TTGA
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Protein sequence | MITTVFVATV LAAALAGGPQ ASPARPCPQA VDDWRRPLPE AELPDGARRR FEAGVRLVLA AACGLSRTGP EFPPRAARGD AEDTLSGRGV PRPPDATVSA PGSPDAVGSS GSGGPESPGA AGFPGSGSPD GTGPSGPGSS DAAVSLASGS SGAPRSAGSG PSGLAGSSGP GSPSRVRQPA VVSSARPEAS RSLSAPARQS RLPSPGQTAV AAALRQVGRP YVWGGGSSAG PTGGGFDCSG LALHAWSRAG AALTHYTGSQ FRQGRRVPFS QLRPGDLVFF GGGTGDPTHV GVYVKNGVMV HAPKTGDVVK TTDFAASAYY RSRYRGAVRP APRTPAS
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