Gene Sros_1515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1515 
Symbol 
ID8664791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1599811 
End bp1600470 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content73% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003337251 
Protein GI271963055 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.254086 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00363064 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGCAGC AGCGGGCCGG GGCCAGAGAC GCCGACACGG GGCGGGATCG CCGGGAATCC 
GGGACGGGTG CGACCACGAG GAAGGGGGAC GGCCGCCGGG CCGGGACGAG GCTCAGGCTG
TTCACGGCGG CGGTGGAGGT GATCGCGGAG CAGGGCTACA CCGCCGCCAC GGTGGACGCG
ATCGCCGAAC GGGCCGGGGT GGCCAAGGGC ACCGTGTTCT ACAACTTCGG CAGCAAGGAG
GCGCTCTTCG CCGCGCTGCT CGAACACGGC ATCCAGCGGC TGGCCGACGC GATGGGCGAG
GCGGACACCG GACAGGCGGC GCTCGACGCC CTCGACTCGG TGGTCATGGC GCAGCTGCGG
TTCTTCGAGG AGTACGGCGC GTTCGCCCGG GTGCTGCTCG CCGAGATGTG GCGTACGTCC
TGGCAGGACG CGGTCGCCCG GCTGCGCGAG CAGGCGCTGG GGGTCTACGC GGGCGCGCTG
CGCCGGGCGG TGGCCGAGGG CGCGATCCGG GAGGACCTGG ACGTGGAGAC CGCGGCGACC
GCCGTGTTCG GCATGGTGCT GACCGTCTCG ATCGAGCGCC GGGCGCTGCA CCCGGACCGT
CCGATCGAGC AGGTGCACGC CACCCTCGTC GATCTCCTGC ACGGGCGGGT CTCCGGCTAG
 
Protein sequence
MTQQRAGARD ADTGRDRRES GTGATTRKGD GRRAGTRLRL FTAAVEVIAE QGYTAATVDA 
IAERAGVAKG TVFYNFGSKE ALFAALLEHG IQRLADAMGE ADTGQAALDA LDSVVMAQLR
FFEEYGAFAR VLLAEMWRTS WQDAVARLRE QALGVYAGAL RRAVAEGAIR EDLDVETAAT
AVFGMVLTVS IERRALHPDR PIEQVHATLV DLLHGRVSG