Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_1515 |
Symbol | |
ID | 8664791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 1599811 |
End bp | 1600470 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | putative transcriptional regulator, TetR family |
Protein accession | YP_003337251 |
Protein GI | 271963055 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.254086 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00363064 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGCAGC AGCGGGCCGG GGCCAGAGAC GCCGACACGG GGCGGGATCG CCGGGAATCC GGGACGGGTG CGACCACGAG GAAGGGGGAC GGCCGCCGGG CCGGGACGAG GCTCAGGCTG TTCACGGCGG CGGTGGAGGT GATCGCGGAG CAGGGCTACA CCGCCGCCAC GGTGGACGCG ATCGCCGAAC GGGCCGGGGT GGCCAAGGGC ACCGTGTTCT ACAACTTCGG CAGCAAGGAG GCGCTCTTCG CCGCGCTGCT CGAACACGGC ATCCAGCGGC TGGCCGACGC GATGGGCGAG GCGGACACCG GACAGGCGGC GCTCGACGCC CTCGACTCGG TGGTCATGGC GCAGCTGCGG TTCTTCGAGG AGTACGGCGC GTTCGCCCGG GTGCTGCTCG CCGAGATGTG GCGTACGTCC TGGCAGGACG CGGTCGCCCG GCTGCGCGAG CAGGCGCTGG GGGTCTACGC GGGCGCGCTG CGCCGGGCGG TGGCCGAGGG CGCGATCCGG GAGGACCTGG ACGTGGAGAC CGCGGCGACC GCCGTGTTCG GCATGGTGCT GACCGTCTCG ATCGAGCGCC GGGCGCTGCA CCCGGACCGT CCGATCGAGC AGGTGCACGC CACCCTCGTC GATCTCCTGC ACGGGCGGGT CTCCGGCTAG
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Protein sequence | MTQQRAGARD ADTGRDRRES GTGATTRKGD GRRAGTRLRL FTAAVEVIAE QGYTAATVDA IAERAGVAKG TVFYNFGSKE ALFAALLEHG IQRLADAMGE ADTGQAALDA LDSVVMAQLR FFEEYGAFAR VLLAEMWRTS WQDAVARLRE QALGVYAGAL RRAVAEGAIR EDLDVETAAT AVFGMVLTVS IERRALHPDR PIEQVHATLV DLLHGRVSG
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