Gene Sros_1424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1424 
Symbol 
ID8664699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1488399 
End bp1489139 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content71% 
IMG OID 
Productputative transcriptional regulator, GntR family 
Protein accessionYP_003337161 
Protein GI271962965 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.07575 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0454978 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCAGA TCGATCCGGA CAGCCCGGTA CCGAAGTACT TCCAGCTTCG GGAGATCCTC 
CTCGACCTCA TCGAGAACAA CGAGCTGGCG ATCGGCATGG CGATCCCGTC CGAGCGCGAG
CTCTGCCAGC GCTTCGGGCT GTCCCGGATG ACCGTACGGC AGGCCGTCGA CCACCTGGTC
TCCGAGGGCA GGCTGCAGCG CGTCGCGGGC AAGGGGACCT TCGTGGCCCG CCCCAAGATC
GAGATGGCCC TCCGGCTGAC CTCCTTCAGC GACGAGATGC GCGCCCGGGG CATGGAACCC
GGCTCCCGCG ACCTGGACCG CCGGGTGGTC AGGGCCAGCG CGCACCTCGC CAGGGAGCTC
GGCATCCGGC CCGGGGACGA GGTGCACTTC ATCGAGCGGC TGCGCACCGC GGCCGACGAG
CCCATGTGCA TCGAGCGGGC CCACATCCCG GTCTCCCTCG CGCCCGACCT CGACACCCAC
GACCTGACGG GCCGTTCCCT GTACGCGCTG CTCGAGACCC GCTACGGCCT GGTGCTCGAC
GCGGGCGAGC TCACCATCGA CGGCGGCATA GCCGATCCCG GGGACGCCGA CCTGCTGAAA
CTGCCGCGCG GCGGAGCCGT CCTGCTGCTC CAGCGACGCT CCTTCGCCGG AGGTGTCTGC
GCCGAACTCG GGGTCTCCAC CTACCGCGCC GACCGCTACC AGCTCCGCAC GGTCCTGGAA
ATACCGGCGC GCCGCGCCTG A
 
Protein sequence
MAQIDPDSPV PKYFQLREIL LDLIENNELA IGMAIPSERE LCQRFGLSRM TVRQAVDHLV 
SEGRLQRVAG KGTFVARPKI EMALRLTSFS DEMRARGMEP GSRDLDRRVV RASAHLAREL
GIRPGDEVHF IERLRTAADE PMCIERAHIP VSLAPDLDTH DLTGRSLYAL LETRYGLVLD
AGELTIDGGI ADPGDADLLK LPRGGAVLLL QRRSFAGGVC AELGVSTYRA DRYQLRTVLE
IPARRA