Gene Sros_1335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1335 
Symbol 
ID8664610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1381820 
End bp1382482 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content63% 
IMG OID 
Productmembrane protein-like protein 
Protein accessionYP_003337073 
Protein GI271962877 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.105577 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.45815 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGGAT TTATCCGGCA AGGCGTGACA TTTATTGAAA TATTCTTAGC TGACTGGTAT 
GCACAACACC TGGTCAACCG GCAGGCGGAG CCCGGGACGC CCCCGGTAGC CTGGCAGAAG
AATGTCCGAG GTCCTCCCGA GTGGCGGATC CCCAGCCAAC CTGGAAAGGA CCGTGCAGGA
GACGTGCAGT TTCTGCGAGG TGCCTACGAA CGGCTCTCCG GTCTGATCCG CGAGCTGTCG
AAGTTCGGGA CCATCGGGGC GATCGCCTTC GTCATCGACA CCGGCGGCTT CAACCTCCTC
CAGTACGGCC TGCACTGGGG CACCCTGACC TCCAAGGTCA TCGCCACCGT GATCGCGACC
ACCTTCGCCT ACTTCGGCAA CCGCTTCTGG ACCTACCGGC ACCGGGAGCA GAGCGGGCTC
GCCCGGGAGT ATTTCCTGTT CTTCCTGCTC AACGGGGTCG CCCTACTGAT CGGGCTGCTC
TGCATCGGCT TCACCCGCTA CACCCTGGAG CTGACCGACC CGCTGAGCAT CAACGTGGCC
AACCTGATCG GCATCGGCCT GGGCACGCTG TTCCGCTTCT GGTCCTACAA GAAGTGGGTC
TTCCTGGCCG CCACCGAAGA GGTGCCGAAG GAGCTCCCCG ACGAGGTCAC GCGGGCCCGC
TGA
 
Protein sequence
MPGFIRQGVT FIEIFLADWY AQHLVNRQAE PGTPPVAWQK NVRGPPEWRI PSQPGKDRAG 
DVQFLRGAYE RLSGLIRELS KFGTIGAIAF VIDTGGFNLL QYGLHWGTLT SKVIATVIAT
TFAYFGNRFW TYRHREQSGL AREYFLFFLL NGVALLIGLL CIGFTRYTLE LTDPLSINVA
NLIGIGLGTL FRFWSYKKWV FLAATEEVPK ELPDEVTRAR