Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_1335 |
Symbol | |
ID | 8664610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 1381820 |
End bp | 1382482 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | membrane protein-like protein |
Protein accession | YP_003337073 |
Protein GI | 271962877 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.105577 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.45815 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGGAT TTATCCGGCA AGGCGTGACA TTTATTGAAA TATTCTTAGC TGACTGGTAT GCACAACACC TGGTCAACCG GCAGGCGGAG CCCGGGACGC CCCCGGTAGC CTGGCAGAAG AATGTCCGAG GTCCTCCCGA GTGGCGGATC CCCAGCCAAC CTGGAAAGGA CCGTGCAGGA GACGTGCAGT TTCTGCGAGG TGCCTACGAA CGGCTCTCCG GTCTGATCCG CGAGCTGTCG AAGTTCGGGA CCATCGGGGC GATCGCCTTC GTCATCGACA CCGGCGGCTT CAACCTCCTC CAGTACGGCC TGCACTGGGG CACCCTGACC TCCAAGGTCA TCGCCACCGT GATCGCGACC ACCTTCGCCT ACTTCGGCAA CCGCTTCTGG ACCTACCGGC ACCGGGAGCA GAGCGGGCTC GCCCGGGAGT ATTTCCTGTT CTTCCTGCTC AACGGGGTCG CCCTACTGAT CGGGCTGCTC TGCATCGGCT TCACCCGCTA CACCCTGGAG CTGACCGACC CGCTGAGCAT CAACGTGGCC AACCTGATCG GCATCGGCCT GGGCACGCTG TTCCGCTTCT GGTCCTACAA GAAGTGGGTC TTCCTGGCCG CCACCGAAGA GGTGCCGAAG GAGCTCCCCG ACGAGGTCAC GCGGGCCCGC TGA
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Protein sequence | MPGFIRQGVT FIEIFLADWY AQHLVNRQAE PGTPPVAWQK NVRGPPEWRI PSQPGKDRAG DVQFLRGAYE RLSGLIRELS KFGTIGAIAF VIDTGGFNLL QYGLHWGTLT SKVIATVIAT TFAYFGNRFW TYRHREQSGL AREYFLFFLL NGVALLIGLL CIGFTRYTLE LTDPLSINVA NLIGIGLGTL FRFWSYKKWV FLAATEEVPK ELPDEVTRAR
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